| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4453 |
|---|
| Symbol | |
|---|
| ID | 5833683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4960374 |
|---|
| End bp | 4961063 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641370246 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_001641892 |
|---|
| Protein GI | 163853849 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.731843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CGGTCAGCAG CCCCATGATG AGAGCAGCGT CGAGCAAGGG TGCCGCCACC
CCCGTCCTGG TCATCGACGA TCACCCGATC GTCCTCCAGG GCTGTCGCCG CGTGCTGGAG
GATGCCGGAA TCGAGACCGT GGTCGAGGCG ACCGGCGTCG TCTCCGGTTA CCGCGCCTTC
CACCGCCTGC GCCCGCCGGT GGTGATCTGC GATCTCACCT TCCAGGGCAG CGGGCTCGCC
GGCCTCGCCC TGATCCGGCG CATGCGCGCC ATCGAGCCCG AGACCCGCGT GCTCGTGTTC
TCGATGCACA ACGATCCCGT CATCGTCTCG CGGGCGCTGG AGGCCGGGGC GCTCGGCTAC
GTGCTCAAGG ATCACGCTTC GAACGAGCTG TTCCAGGCGT TCGAGCGGGT GCGTGCGGGC
GAGGTCTATC TCGACCGGCG GCTCGCCACC GAGGTCGCGA TGCTGCGCGC CGACCCGCGC
CGCACCCCGG AGACGCAGCT CACGCCGCGC GAGCAGCAGA TCCTGGCGCG CCTCGCCCAG
GGCAAGTCCT ACGGCGCCAT CGCCGCCGAC CTCTCGGTCA GCTACAAGAC CGTCACCAAT
GCCTGCTCGC AGATGCGCCA GAAGCTCAGG GTGCGCACGC TGGCCGAGCT GATCCACGTC
GCGGTGACCC AGGCGCAGCG GCAGGGTTGA
|
|---|
| Protein sequence | MNAPVSSPMM RAASSKGAAT PVLVIDDHPI VLQGCRRVLE DAGIETVVEA TGVVSGYRAF
HRLRPPVVIC DLTFQGSGLA GLALIRRMRA IEPETRVLVF SMHNDPVIVS RALEAGALGY
VLKDHASNEL FQAFERVRAG EVYLDRRLAT EVAMLRADPR RTPETQLTPR EQQILARLAQ
GKSYGAIAAD LSVSYKTVTN ACSQMRQKLR VRTLAELIHV AVTQAQRQG
|
|---|
| |