More than 300 homologs were found in PanDaTox collection
for query gene Mnod_4951 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  100 
 
 		 210 aa  415  9.999999999999999e-116  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  88.52 
 
 		 210 aa  365  1e-100  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  69.42 
 
 		 229 aa  292  2e-78  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  69.42 
 
 		 221 aa  292  2e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  68.93 
 
 		 220 aa  290  8e-78  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  69.23 
 
 		 224 aa  288  6e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  62.07 
 
 		 211 aa  260  1e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  58.62 
 
 		 226 aa  232  2.0000000000000002e-60  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  57.64 
 
 		 225 aa  227  1e-58  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  57.64 
 
 		 225 aa  227  1e-58  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  58.33 
 
 		 210 aa  227  1e-58  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  55.94 
 
 		 230 aa  222  3e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  57.07 
 
 		 212 aa  221  4.9999999999999996e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  55.72 
 
 		 208 aa  221  7e-57  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  48.51 
 
 		 218 aa  198  6e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  49.01 
 
 		 211 aa  187  1e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  44.61 
 
 		 206 aa  155  5.0000000000000005e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  43.2 
 
 		 232 aa  146  2.0000000000000003e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  39.5 
 
 		 223 aa  140  1.9999999999999998e-32  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  36.59 
 
 		 213 aa  138  7e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  38.1 
 
 		 224 aa  135  4e-31  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  37.56 
 
 		 229 aa  133  1.9999999999999998e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  40.78 
 
 		 218 aa  129  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  36.63 
 
 		 212 aa  130  2.0000000000000002e-29  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  39.13 
 
 		 214 aa  129  2.0000000000000002e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  39.9 
 
 		 220 aa  127  9.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  42.16 
 
 		 217 aa  127  1.0000000000000001e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  37.68 
 
 		 215 aa  126  2.0000000000000002e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  35.89 
 
 		 213 aa  126  2.0000000000000002e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  37.07 
 
 		 211 aa  125  3e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_010717  PXO_06170  response regulator  38.83 
 
 		 210 aa  125  4.0000000000000003e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_010717  PXO_00996  response regulator  38.83 
 
 		 210 aa  125  4.0000000000000003e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  34.78 
 
 		 213 aa  124  1e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  37.62 
 
 		 212 aa  120  9.999999999999999e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  37.86 
 
 		 222 aa  119  3e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  39.02 
 
 		 210 aa  119  3e-26  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  37.44 
 
 		 226 aa  118  4.9999999999999996e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  35.12 
 
 		 212 aa  117  9.999999999999999e-26  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  35.12 
 
 		 212 aa  116  1.9999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  35.12 
 
 		 212 aa  116  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  38.42 
 
 		 217 aa  116  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  37.44 
 
 		 219 aa  116  1.9999999999999998e-25  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  37.98 
 
 		 222 aa  117  1.9999999999999998e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  35.98 
 
 		 242 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  34.15 
 
 		 216 aa  116  3e-25  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  35.81 
 
 		 224 aa  115  3e-25  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  38.73 
 
 		 223 aa  115  3.9999999999999997e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  36.41 
 
 		 211 aa  115  3.9999999999999997e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_009727  CBUD_0828  response regulator  34.15 
 
 		 216 aa  115  3.9999999999999997e-25  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0183204  n/a   
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  39.51 
 
 		 219 aa  115  3.9999999999999997e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  41.26 
 
 		 219 aa  115  3.9999999999999997e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  39.05 
 
 		 216 aa  115  5e-25  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  43 
 
 		 217 aa  115  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.57 
 
 		 216 aa  114  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.56 
 
 		 221 aa  114  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  37.5 
 
 		 217 aa  113  2.0000000000000002e-24  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  39.51 
 
 		 235 aa  113  2.0000000000000002e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  36.27 
 
 		 216 aa  113  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.36 
 
 		 216 aa  112  3e-24  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  34.29 
 
 		 229 aa  112  3e-24  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  36.59 
 
 		 214 aa  112  4.0000000000000004e-24  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  34.67 
 
 		 220 aa  112  4.0000000000000004e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  36.67 
 
 		 219 aa  112  5e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  35.24 
 
 		 230 aa  112  5e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  36.84 
 
 		 216 aa  112  5e-24  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  33.97 
 
 		 234 aa  111  6e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  111  7.000000000000001e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  36.59 
 
 		 214 aa  111  8.000000000000001e-24  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  111  8.000000000000001e-24  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  111  8.000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  111  8.000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  35.44 
 
 		 221 aa  111  8.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  35.89 
 
 		 215 aa  109  2.0000000000000002e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  34.6 
 
 		 228 aa  109  2.0000000000000002e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  33.65 
 
 		 228 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  110  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  37.62 
 
 		 233 aa  109  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.45 
 
 		 213 aa  109  3e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  109  3e-23  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  36.89 
 
 		 221 aa  109  3e-23  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  34.6 
 
 		 228 aa  109  3e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_3270  response regulator receiver  40.29 
 
 		 220 aa  109  3e-23  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.336161 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  33.8 
 
 		 217 aa  109  3e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  39.18 
 
 		 218 aa  108  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1030  two component LuxR family transcriptional regulator  33.17 
 
 		 215 aa  108  4.0000000000000004e-23  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.3 
 
 		 233 aa  108  4.0000000000000004e-23  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  36.59 
 
 		 228 aa  108  5e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  31.16 
 
 		 215 aa  108  6e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  38.03 
 
 		 226 aa  108  8.000000000000001e-23  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  34.78 
 
 		 210 aa  108  8.000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  33.01 
 
 		 229 aa  107  1e-22  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  37.07 
 
 		 217 aa  107  1e-22  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  34.29 
 
 		 230 aa  107  1e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  36.36 
 
 		 212 aa  107  1e-22  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  36.32 
 
 		 217 aa  107  1e-22  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  34.91 
 
 		 220 aa  106  2e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  37.8 
 
 		 226 aa  107  2e-22  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  34.45 
 
 		 216 aa  106  2e-22  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  38.21 
 
 		 216 aa  106  2e-22  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
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