More than 300 homologs were found in PanDaTox collection
for query gene Mchl_4505 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_4137  response regulator receiver  100 
 
 		 225 aa  437  9.999999999999999e-123  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  100 
 
 		 225 aa  437  9.999999999999999e-123  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  95.13 
 
 		 226 aa  412  1e-114  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  58.22 
 
 		 230 aa  245  4.9999999999999997e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  56.65 
 
 		 220 aa  234  1.0000000000000001e-60  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  56.16 
 
 		 229 aa  232  3e-60  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  56.16 
 
 		 221 aa  233  3e-60  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  56.44 
 
 		 224 aa  230  2e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  55.94 
 
 		 211 aa  229  3e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  57.64 
 
 		 210 aa  227  1e-58  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  54.5 
 
 		 208 aa  224  6e-58  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  57.14 
 
 		 210 aa  223  2e-57  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  49.5 
 
 		 210 aa  185  5e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  49.01 
 
 		 212 aa  180  1e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  43.14 
 
 		 218 aa  180  1e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  44.06 
 
 		 211 aa  163  2.0000000000000002e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  38.28 
 
 		 224 aa  142  3e-33  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  40.39 
 
 		 232 aa  141  9.999999999999999e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  40.59 
 
 		 206 aa  137  1e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  40.1 
 
 		 217 aa  136  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  38.92 
 
 		 223 aa  134  9.999999999999999e-31  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  39.71 
 
 		 218 aa  133  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  34.48 
 
 		 213 aa  130  2.0000000000000002e-29  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  38.12 
 
 		 220 aa  130  2.0000000000000002e-29  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  38.46 
 
 		 217 aa  127  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  35.29 
 
 		 211 aa  127  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  37.5 
 
 		 214 aa  126  2.0000000000000002e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  35.89 
 
 		 229 aa  126  3e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  34.98 
 
 		 212 aa  125  6e-28  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  37.07 
 
 		 223 aa  120  9.999999999999999e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  42.86 
 
 		 217 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  35.78 
 
 		 215 aa  117  9.999999999999999e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  39.71 
 
 		 219 aa  116  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  35.38 
 
 		 219 aa  115  5e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  32.67 
 
 		 213 aa  112  4.0000000000000004e-24  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  36.57 
 
 		 219 aa  112  4.0000000000000004e-24  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.62 
 
 		 233 aa  112  4.0000000000000004e-24  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  34.15 
 
 		 212 aa  112  5e-24  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  34.15 
 
 		 212 aa  112  5e-24  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  35.98 
 
 		 235 aa  112  5e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  35.47 
 
 		 217 aa  110  1.0000000000000001e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  33.66 
 
 		 212 aa  110  2.0000000000000002e-23  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  36.45 
 
 		 219 aa  110  2.0000000000000002e-23  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  34.8 
 
 		 210 aa  110  2.0000000000000002e-23  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  34.76 
 
 		 216 aa  109  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  32.06 
 
 		 213 aa  109  3e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.97 
 
 		 214 aa  110  3e-23  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  35.65 
 
 		 219 aa  109  4.0000000000000004e-23  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  35.15 
 
 		 220 aa  108  5e-23  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.02 
 
 		 215 aa  108  9.000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  35.51 
 
 		 219 aa  107  1e-22  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  33.65 
 
 		 214 aa  107  1e-22  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  33.66 
 
 		 221 aa  107  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  36.32 
 
 		 222 aa  107  1e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  37.93 
 
 		 220 aa  107  1e-22  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  40.29 
 
 		 219 aa  106  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  33.8 
 
 		 214 aa  107  2e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  32.88 
 
 		 222 aa  107  2e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  33.8 
 
 		 214 aa  107  2e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  33.8 
 
 		 214 aa  107  2e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  106  3e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  106  3e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  106  3e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  106  3e-22  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  106  3e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  38.73 
 
 		 219 aa  105  5e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  33.8 
 
 		 214 aa  105  6e-22  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  105  6e-22  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  34.27 
 
 		 214 aa  105  7e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  33.02 
 
 		 220 aa  105  7e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  35.78 
 
 		 225 aa  105  8e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1030  two component LuxR family transcriptional regulator  34.13 
 
 		 215 aa  105  8e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  34.62 
 
 		 236 aa  105  8e-22  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  33.97 
 
 		 215 aa  104  9e-22  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_010172  Mext_3270  response regulator receiver  38.73 
 
 		 220 aa  104  1e-21  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.336161 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.08 
 
 		 224 aa  103  1e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  35.58 
 
 		 218 aa  104  1e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  36.27 
 
 		 225 aa  104  1e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  103  2e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  34.16 
 
 		 205 aa  103  2e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.54 
 
 		 216 aa  103  2e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  103  2e-21  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  36.54 
 
 		 216 aa  103  2e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  33.33 
 
 		 210 aa  103  2e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_003910  CPS_3271  response regulator  29.9 
 
 		 214 aa  103  3e-21  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_010725  Mpop_3468  two component transcriptional regulator, LuxR family  38.73 
 
 		 219 aa  103  3e-21  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  35.47 
 
 		 215 aa  103  3e-21  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  31.1 
 
 		 211 aa  102  3e-21  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  33.33 
 
 		 210 aa  103  3e-21  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  32.38 
 
 		 216 aa  103  3e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  30.52 
 
 		 234 aa  102  4e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  30.95 
 
 		 216 aa  102  4e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_008825  Mpe_A0478  two-component response regulator  37.38 
 
 		 215 aa  102  4e-21  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0760202 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  30.73 
 
 		 207 aa  102  5e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.126193 
 
 
-
 
NC_007974  Rmet_5940  LuxR family response regulator  34.74 
 
 		 220 aa  102  5e-21  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000000781929  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  34.6 
 
 		 231 aa  101  1e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  33.33 
 
 		 215 aa  100  1e-20  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  32.68 
 
 		 213 aa  100  1e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  31.48 
 
 		 274 aa  101  1e-20  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  29.35 
 
 		 216 aa  101  1e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
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