| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1951 |
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| Symbol | |
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| ID | 5110078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2148179 |
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| End bp | 2148829 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503185 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001187444 |
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| Protein GI | 146306979 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.142543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.70584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TGCTGGTAGA TGACCACGCC GTGGTGCGCC AGGGCTACGC CAGCCTGCTG
CGTGCGCTGT TGCCCGAGGT GCAGCTGCGC GAGGCCTGCG ACGGCGAACA GGCCCTGCAG
CGGGTGCAGG AAGAAATCCC CAACCTGGTC ATCATGGATA TCGGCCTGCC CGGCATCAGC
GGTCTGGAAA CCACCCGCCG CCTGCGCCAG CGCCTGCCGC AACTGCGCGT GCTGTTCTTC
AGCATGCACG ACGAACTGCC CCTGGTACGC CAGGCGCTGG ATGCTGGCGC CATCGGCTAC
CTGACCAAGA ACTCGTCGCC GGAAGTGCTG GTGGAGGCGG TCAAACGCAC CGCCGCTGGC
CACGCCTATA TCGAACAGCC ACTGGCCACC CAGCTGGCCT GCAATCCCGC AGGCAGCGAC
GGCCTCGACC CACGCCTGCG CGAGCTGACC CAGCGCGAGT TCGAGATCTT CGTCATGCTC
GCCCGCGGCC TGCCCCCGCG GCAGATCGCC GAGAAGCTGT GCATCAGCGC CAAGACCCTG
TCCAACTACC AGACCCTGGT GAAGAGCAAA CTGCAGATCG CCTCGCAGGC GGAGTTGGTG
CATCTGGCGA TCGATAGCGG GGTGGTGCGG GTGGGGTTGG AGAGTGCCTG A
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| Protein sequence | MKILLVDDHA VVRQGYASLL RALLPEVQLR EACDGEQALQ RVQEEIPNLV IMDIGLPGIS
GLETTRRLRQ RLPQLRVLFF SMHDELPLVR QALDAGAIGY LTKNSSPEVL VEAVKRTAAG
HAYIEQPLAT QLACNPAGSD GLDPRLRELT QREFEIFVML ARGLPPRQIA EKLCISAKTL
SNYQTLVKSK LQIASQAELV HLAIDSGVVR VGLESA
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