| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3271 |
|---|
| Symbol | |
|---|
| ID | 3521501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3401665 |
|---|
| End bp | 3402309 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285720 |
|---|
| Product | response regulator |
|---|
| Protein accession | YP_269953 |
|---|
| Protein GI | 71281032 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0222898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAATG TTTTATTGGT TGATGATCAC CACCTTGTAC GTGTCGGTAT TAATAAAATT
TTAACGAGCG TTAAAGGGTT GAAGGTCGTC GGCGAATGTG AAACAGGTGA AGAAGCCATT
AAATTCTGCC GAAACAGTGA ACCTGATGTT TTACTCATGG ATATGGATAT GCCAGGTATG
GGTGGACTTG AGGCAACCAA GAAAATTTTA CGTTTTGCAC CTGATGTTAA AATTATTGTT
TTAACTGCGC ATACCGAAGA CCCTTTTCCA AGTAAAGTGA TGCAAATGGG GGCCGCTGGC
TATTTAACTA AAGATGCTGG TCCTGATGAA ATGGTTAATG CTATTCGTGC TGTTCACAGT
GGTCAACGTT ACCTCCCTTC TGATATCGCC CAAAAAATGG CATTGAACCA GTTCAAATCG
GTTGAAGATA ATCCTTTTAA TACATTATCC GATCGAGAAT TACAGATTAT GATCATGATC
ACGCGTGGTG ATAAAGTACC CGCTATATCT GAGCATTTAA ATTTGAGTAC TAAAACAATT
AATAGTTATC GTTATCGCAT GTTTGAAAAA CTTGATGTTA GTAATGATGT AGAGCTAACG
CATTTAGCGA TCCGATATGG TATGTTAAAA ACAGAAAAGC TGTAG
|
|---|
| Protein sequence | MINVLLVDDH HLVRVGINKI LTSVKGLKVV GECETGEEAI KFCRNSEPDV LLMDMDMPGM
GGLEATKKIL RFAPDVKIIV LTAHTEDPFP SKVMQMGAAG YLTKDAGPDE MVNAIRAVHS
GQRYLPSDIA QKMALNQFKS VEDNPFNTLS DRELQIMIMI TRGDKVPAIS EHLNLSTKTI
NSYRYRMFEK LDVSNDVELT HLAIRYGMLK TEKL
|
|---|
| |