Gene BBta_6075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6075 
Symbol 
ID5154385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6299552 
End bp6300202 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID640560787 
Producttwo-component response regulator 
Protein accessionYP_001241908 
Protein GI148257323 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAGCA TGACGAACGC GGCGGGCACG ATCATGCTGG TGGACGACCA CGCCGTGGTG 
CGCGAGGGCT ATCGGTCCAT GCTGCAGAAG CAGCACGGCC TGCGTGTGGT CGCCGAAGCG
TCCGATGGCG CCGAGGCCTA CCGCCTGTTC AAGGAGGTGA GGCCGGATCT CGTCATCATG
GACCTGACGA TGCCGGGCGT CGGCGGCATC GAGGGCATTC GACGCATCCG GCAATGGGAT
CGCGACGCGC GCATTCTCGT GTTCACCATG CATGAGAACG CGGGATTCGC CGTGCAGGCG
ATCCGCGCCG GTGCCCGCGG CTATGTCACC AAGAGCAGCC CCCCGGAGAT CCTGGTCCGC
GCGGTGATGG AGGTGCTCGG CGGCGCCATC GCGATCAGCC CCGACATCGA CCACGAACTC
GCGCTCAGCC GCCTGTGTGG CGAGAGGGCC GCCGCCGACG TCCTCACGGC GCGCGAGTTC
GAGGTCATGC AGATGCTGCT CGCCGAGCGC ACCACCGAGG AGATCGCATC CGCGCTTCAC
CTCAGCCCGA AGACGATCGC CAATCTGCAT TCGTTGATCA AGGACAAGCT CGGCGTCGGC
ACCGATATCG AGCTGGTGCG CCTGGCGCTG CGCCAGGGCC TGCTGACCTG A
 
Protein sequence
MRSMTNAAGT IMLVDDHAVV REGYRSMLQK QHGLRVVAEA SDGAEAYRLF KEVRPDLVIM 
DLTMPGVGGI EGIRRIRQWD RDARILVFTM HENAGFAVQA IRAGARGYVT KSSPPEILVR
AVMEVLGGAI AISPDIDHEL ALSRLCGERA AADVLTAREF EVMQMLLAER TTEEIASALH
LSPKTIANLH SLIKDKLGVG TDIELVRLAL RQGLLT