| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1698 |
|---|
| Symbol | |
|---|
| ID | 8225269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2066586 |
|---|
| End bp | 2067209 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644929552 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003086104 |
|---|
| Protein GI | 255035483 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.126193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTAT TCATCATCGA CGACCACCCT ATTGTATTGC AAGGACTCAA AAACCTGCTC
GAATCGCGGG AAGGCATACG CGTCACCGGC ATTTTCGACC AGGCCGATAG CGCATTGGCC
GCCCTGGACA GCCATATCCC GGAGGTGATG CTGATGGACA TCAACCTGCC CGACATCAGC
GGCGTGACCT TGTGCCAGCA GGTGAAGCAG GCCCATCCCG AAATCCGGGT TGTGGCGCTC
AGCATCCACA ACGAACGCAG CGTGATCATG AGCATGCTGC AAAGCGGCGC GAGCGGTTAT
GTGCTCAAAA ATGCAATCGG CGACGACATT GTGGCCGCAT TGCAGGCGGC GATGGAAGGC
CAGATATACC TTTGCGCCGA AACCCAGAAA GCCCTGAACG AAGCCCCCGG CACCGAACCG
AAGGAAATCC CCCGCCTCAC GCGCCGCGAG AAAGAAATCC TCGAACTGAT CGGCCAGGGC
TACACCACGC AGCAAATCGC CGCCGAGCTT TTTATCAGTA CCCACACCGT GGAAAGCCAC
CGCAAAAACC TGAAAGAGAA ATTCGGGGTG CCCAACACGG CCACCGTGGT ACGGATGGCG
GCCGAGCTGG GGCTGATGCG CTAG
|
|---|
| Protein sequence | MDVFIIDDHP IVLQGLKNLL ESREGIRVTG IFDQADSALA ALDSHIPEVM LMDINLPDIS
GVTLCQQVKQ AHPEIRVVAL SIHNERSVIM SMLQSGASGY VLKNAIGDDI VAALQAAMEG
QIYLCAETQK ALNEAPGTEP KEIPRLTRRE KEILELIGQG YTTQQIAAEL FISTHTVESH
RKNLKEKFGV PNTATVVRMA AELGLMR
|
|---|
| |