More than 300 homologs were found in PanDaTox collection
for query gene Dfer_1698 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  100 
 
 		 207 aa  424  1e-118  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.126193 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  59.31 
 
 		 207 aa  254  6e-67  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  47.8 
 
 		 208 aa  206  2e-52  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  46.57 
 
 		 205 aa  194  7e-49  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  46.53 
 
 		 211 aa  187  1e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal  1 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  43.14 
 
 		 206 aa  177  1e-43  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_013132  Cpin_4278  two component transcriptional regulator, LuxR family  39.81 
 
 		 213 aa  162  2.0000000000000002e-39  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.0894003 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  39.02 
 
 		 233 aa  153  2e-36  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  41.75 
 
 		 223 aa  150  2e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  36.23 
 
 		 220 aa  149  2e-35  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  39.13 
 
 		 214 aa  145  5e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  38 
 
 		 213 aa  144  1e-33  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  38 
 
 		 213 aa  144  1e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  37.14 
 
 		 223 aa  142  4e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  37.56 
 
 		 214 aa  141  5e-33  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_6527  two component transcriptional regulator, LuxR family  37.02 
 
 		 215 aa  141  5e-33  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.15 
 
 		 206 aa  140  9e-33  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_0559  two component LuxR family transcriptional regulator  32.67 
 
 		 211 aa  140  9.999999999999999e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0841173  n/a   
 
 
-
 
NC_013132  Cpin_1440  two component transcriptional regulator, LuxR family  35.29 
 
 		 208 aa  139  3e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  36.63 
 
 		 214 aa  139  3.9999999999999997e-32  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  36.59 
 
 		 224 aa  137  1e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  35.89 
 
 		 224 aa  136  2e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  36.14 
 
 		 217 aa  135  5e-31  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  33.49 
 
 		 214 aa  134  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  36.5 
 
 		 215 aa  133  1.9999999999999998e-30  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  33.17 
 
 		 206 aa  133  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  132  3e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  36.54 
 
 		 224 aa  132  3e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  38.5 
 
 		 213 aa  132  3e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  36.59 
 
 		 211 aa  132  3.9999999999999996e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  35.12 
 
 		 231 aa  131  6e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.58 
 
 		 212 aa  131  6e-30  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  33.82 
 
 		 213 aa  131  7.999999999999999e-30  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  32.35 
 
 		 213 aa  131  9e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  33.82 
 
 		 215 aa  130  1.0000000000000001e-29  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  34.3 
 
 		 220 aa  130  1.0000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.5 
 
 		 213 aa  130  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.5 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  35.15 
 
 		 214 aa  130  2.0000000000000002e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  33.33 
 
 		 211 aa  130  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  33.49 
 
 		 213 aa  130  2.0000000000000002e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  33.83 
 
 		 213 aa  128  5.0000000000000004e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  32.83 
 
 		 213 aa  128  5.0000000000000004e-29  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  32.51 
 
 		 229 aa  128  7.000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.95 
 
 		 216 aa  127  8.000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  33.66 
 
 		 215 aa  127  9.000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.32 
 
 		 213 aa  127  1.0000000000000001e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.64 
 
 		 224 aa  127  1.0000000000000001e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  33.33 
 
 		 213 aa  127  1.0000000000000001e-28  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  33.01 
 
 		 220 aa  127  1.0000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  35.15 
 
 		 223 aa  126  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.67 
 
 		 221 aa  126  2.0000000000000002e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  35.58 
 
 		 222 aa  127  2.0000000000000002e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  33.65 
 
 		 222 aa  125  3e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  32.7 
 
 		 215 aa  126  3e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  126  3e-28  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  125  4.0000000000000003e-28  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  32.68 
 
 		 206 aa  125  4.0000000000000003e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  125  4.0000000000000003e-28  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  125  4.0000000000000003e-28  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  125  4.0000000000000003e-28  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  32.55 
 
 		 222 aa  124  7e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  32.69 
 
 		 216 aa  124  8.000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  37.93 
 
 		 214 aa  124  8.000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  30.99 
 
 		 219 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  34.62 
 
 		 216 aa  124  1e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  34.5 
 
 		 214 aa  124  1e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  37.56 
 
 		 226 aa  124  1e-27  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  33.17 
 
 		 208 aa  124  1e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  32.37 
 
 		 213 aa  123  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  36.89 
 
 		 228 aa  123  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  33.98 
 
 		 209 aa  123  2e-27  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  34.93 
 
 		 218 aa  123  2e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  35 
 
 		 218 aa  123  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  33.98 
 
 		 209 aa  123  2e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  33.98 
 
 		 209 aa  123  2e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  32.68 
 
 		 215 aa  123  2e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  34.13 
 
 		 216 aa  123  2e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  34.6 
 
 		 221 aa  123  2e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  33.33 
 
 		 228 aa  123  2e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  30.99 
 
 		 229 aa  122  3e-27  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  38.21 
 
 		 218 aa  122  3e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  31.8 
 
 		 218 aa  122  3e-27  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  32.67 
 
 		 216 aa  122  3e-27  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  34.8 
 
 		 233 aa  122  3e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_1909  response regulator receiver protein  35.07 
 
 		 220 aa  122  3e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.631594  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  34.93 
 
 		 218 aa  122  3e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  33.18 
 
 		 219 aa  122  3e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  34.93 
 
 		 218 aa  122  3e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  34.45 
 
 		 207 aa  122  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  32.37 
 
 		 234 aa  122  4e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>