| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1440 |
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| Symbol | |
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| ID | 8357581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1754011 |
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| End bp | 1754637 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644963620 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003121138 |
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| Protein GI | 256420485 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGCC TGTATTTCGT AAACAATCAT CCCCTCATTC TTGAAGGCCT GCATTCATTT
TTTGATGACG AAAATGATAT ACTGATCGCA GGACACACCC GGAGTGGCTA TGGTTGTCTC
AAATTCCTGA TGCACAACAG CGTCGACATC ATCATTATTG ATACCTGTCT GCCTGATATA
GACAGCGCAG CATTATGTGC CAATATCAGG ATGGAATATC CAACCGTAAT GGTATTGGTA
TTGAGCTTCC TGAAAGAAGA AAGATATATC GACCGGCTGT TGCAAAGCGG CGCAGGCGGT
TACGTACTCA ATACTGCGGA TAAAGATGAA CTGCTTTTTG CCGTTCATTC CGTTTATGCC
GGTGGAGTCT ATCTCTCCCC GGTAATCAAA CAAGCTATGA GCAGCGAACG GGTTGGGCTA
CAAAAAAATT TCCCTCCTCT GACGAGAAGG GAAAAAGAAG TTTTAAGTCT GATATCTGAA
GGAAATACAA ATGCTGAAAT TGCAGAAAAA CTGTTTATCA GTGCAGATAC TGTGAATAGT
CACCGGAAAA AATTACTGGC CAAACTGGAA GTAAAAAATA CTGCAATGCT GATCAAGTAC
GCTGTTGACA ACAAACTGCT GGTCTGA
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| Protein sequence | MIRLYFVNNH PLILEGLHSF FDDENDILIA GHTRSGYGCL KFLMHNSVDI IIIDTCLPDI
DSAALCANIR MEYPTVMVLV LSFLKEERYI DRLLQSGAGG YVLNTADKDE LLFAVHSVYA
GGVYLSPVIK QAMSSERVGL QKNFPPLTRR EKEVLSLISE GNTNAEIAEK LFISADTVNS
HRKKLLAKLE VKNTAMLIKY AVDNKLLV
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