More than 300 homologs were found in PanDaTox collection
for query gene Cpin_1732 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  100 
 
 		 211 aa  426  1e-118  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  39.71 
 
 		 213 aa  151  7e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  40.76 
 
 		 205 aa  148  7e-35  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  39.51 
 
 		 207 aa  146  2.0000000000000003e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  36.36 
 
 		 208 aa  139  3.9999999999999997e-32  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  36.07 
 
 		 219 aa  137  1e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  36.04 
 
 		 224 aa  136  2e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  34.56 
 
 		 220 aa  135  4e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  38.64 
 
 		 206 aa  135  7.000000000000001e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  35.59 
 
 		 225 aa  134  9.999999999999999e-31  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013132  Cpin_5915  two component transcriptional regulator, LuxR family  35.55 
 
 		 207 aa  133  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00974735  normal  1 
 
 
-
 
NC_013132  Cpin_1440  two component transcriptional regulator, LuxR family  38.28 
 
 		 208 aa  133  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  36.59 
 
 		 207 aa  132  3.9999999999999996e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.126193 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  36.62 
 
 		 222 aa  130  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  34.93 
 
 		 220 aa  129  3e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  29.91 
 
 		 229 aa  128  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.55 
 
 		 212 aa  128  7.000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  35.07 
 
 		 217 aa  127  8.000000000000001e-29  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  36.45 
 
 		 219 aa  127  9.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.21854 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.76 
 
 		 233 aa  126  2.0000000000000002e-28  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  36.57 
 
 		 219 aa  127  2.0000000000000002e-28  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.715181 
 
 
-
 
NC_013132  Cpin_4278  two component transcriptional regulator, LuxR family  34.45 
 
 		 213 aa  126  2.0000000000000002e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.0894003 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  32.39 
 
 		 219 aa  126  2.0000000000000002e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009727  CBUD_0726  response regulator  33.49 
 
 		 211 aa  126  3e-28  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  33.97 
 
 		 214 aa  125  6e-28  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.65 
 
 		 214 aa  124  7e-28  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  33.97 
 
 		 221 aa  124  8.000000000000001e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  36.97 
 
 		 211 aa  124  1e-27  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.1 
 
 		 213 aa  124  1e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  39.9 
 
 		 211 aa  124  1e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal  1 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  34.63 
 
 		 222 aa  124  1e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  32.86 
 
 		 223 aa  123  2e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0830  transcriptional regulator  33.01 
 
 		 211 aa  123  2e-27  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.07 
 
 		 215 aa  123  2e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  33.49 
 
 		 218 aa  123  2e-27  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.33 
 
 		 216 aa  123  2e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  35.68 
 
 		 216 aa  123  2e-27  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_2963  two component transcriptional regulator, LuxR family  34.72 
 
 		 219 aa  123  3e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.55 
 
 		 215 aa  122  3e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  33.49 
 
 		 216 aa  122  4e-27  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_6527  two component transcriptional regulator, LuxR family  36.49 
 
 		 215 aa  122  4e-27  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  33.17 
 
 		 215 aa  122  4e-27  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  33.18 
 
 		 244 aa  122  4e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  34.31 
 
 		 220 aa  122  5e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  33.01 
 
 		 223 aa  122  5e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  33.33 
 
 		 232 aa  122  5e-27  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.35 
 
 		 217 aa  122  5e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.35 
 
 		 217 aa  122  5e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  31.16 
 
 		 218 aa  121  6e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  32.86 
 
 		 232 aa  121  8e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.27 
 
 		 215 aa  121  8e-27  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.68 
 
 		 216 aa  121  8e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  31.94 
 
 		 217 aa  120  9.999999999999999e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.18 
 
 		 218 aa  120  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  34.55 
 
 		 223 aa  120  1.9999999999999998e-26  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal  1 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  33.01 
 
 		 214 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.55 
 
 		 222 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.32 
 
 		 216 aa  120  1.9999999999999998e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  34.91 
 
 		 226 aa  120  1.9999999999999998e-26  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B1780  EsrB  32.21 
 
 		 212 aa  119  3e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  35.1 
 
 		 213 aa  119  3e-26  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  33.49 
 
 		 216 aa  119  3e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  30.62 
 
 		 223 aa  119  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  33.17 
 
 		 214 aa  119  3.9999999999999996e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  34.45 
 
 		 224 aa  119  3.9999999999999996e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  33.97 
 
 		 206 aa  119  3.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.33 
 
 		 232 aa  118  6e-26  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  32.7 
 
 		 218 aa  118  6e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_6489  two component transcriptional regulator, LuxR family  35.65 
 
 		 219 aa  118  6e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.324114  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  33.8 
 
 		 218 aa  118  7e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.54 
 
 		 207 aa  118  7e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  34.42 
 
 		 219 aa  118  7.999999999999999e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1446  response regulator receiver protein  32.69 
 
 		 209 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0167897  normal  0.0778626 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.96 
 
 		 218 aa  117  9.999999999999999e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  35.18 
 
 		 221 aa  117  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1950  hypothetical protein  31.73 
 
 		 212 aa  117  9.999999999999999e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.0094858 
 
 
-
 
NC_011094  SeSA_A1489  EsrB  31.73 
 
 		 212 aa  117  9.999999999999999e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.121116  normal  0.320198 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  31.9 
 
 		 226 aa  117  9.999999999999999e-26  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  32.86 
 
 		 218 aa  117  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  32.86 
 
 		 215 aa  117  9.999999999999999e-26  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  32.38 
 
 		 218 aa  117  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C1526  two-component response regulator EsrB  31.73 
 
 		 212 aa  117  9.999999999999999e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  hitchhiker  0.00169027 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  32.86 
 
 		 215 aa  117  9.999999999999999e-26  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  32.38 
 
 		 218 aa  117  9.999999999999999e-26  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  32.86 
 
 		 215 aa  117  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  34.25 
 
 		 213 aa  117  1.9999999999999998e-25  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  33.65 
 
 		 222 aa  116  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.8 
 
 		 229 aa  117  1.9999999999999998e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  35.38 
 
 		 218 aa  116  3e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  34.26 
 
 		 221 aa  116  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  31.9 
 
 		 209 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  35.19 
 
 		 219 aa  116  3e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  33.96 
 
 		 216 aa  115  3e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_013132  Cpin_6821  two component transcriptional regulator, LuxR family  33.49 
 
 		 225 aa  115  3.9999999999999997e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.121688  normal  0.121136 
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  30.33 
 
 		 232 aa  115  3.9999999999999997e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  30.95 
 
 		 210 aa  115  3.9999999999999997e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  30.95 
 
 		 210 aa  115  3.9999999999999997e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  30.66 
 
 		 217 aa  115  3.9999999999999997e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  30.95 
 
 		 210 aa  115  3.9999999999999997e-25  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  32.85 
 
 		 217 aa  115  3.9999999999999997e-25  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
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