| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2963 |
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| Symbol | |
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| ID | 8226536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3626202 |
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| End bp | 3626861 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930793 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003087343 |
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| Protein GI | 255036722 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCC TTAAACTAGG AATCGCCGAC GATCACGAAT TGTTCAGAAA GGGGTTTATC
TCCATGCTGA GCGGCATTCC CGATTTCGAA TTCATACTGG AAGCCGGCAA CGGCCAGGAA
CTGCTGGACC GGCTGCCCGC CAATACGCCC GACATCGTCT TCATGGACCT GCAAATGCCC
GTGATGGATG GCATACAGGC CACGGAAGCC GCTTTCGAGC GCTTTCCGAA CATCAAGATC
ATCGTCGTTT CGATGTATAA TGAAGACCGT TTCGTGATCC ACATGCTCGA AAAAGGCGTG
CAGGGATATT TGCTGAAAGA TACCAGTCCC GACGAAGTGG AAAAAGCCAT CCGGCGCGTG
CACGAAGAAG GTTTCTACTA CAACGACTTC GTGTCCAAGG CCATGCACCG CAAAATGGTG
AACCGGCAGG TCAACAAGCA CCCATTCTTC CCGAATGCAT GTAATGTGGC ACTTTCATCG
CGCGAAAAAG AGGTACTGCA ACTGATCTGC GACGGACTTT CAACCACAGA AATCGGCGAT
AAGCTTTTCA TCAGCGTCCG CACAGTCGAA GGCCACCGGT TACGGGTTTT GGAAAAAACA
GGCACGAAAA GCACCGCGGC GGCTGTCGCA TTTGCCTACA AAAACCAGCT GCTGAGCTAA
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| Protein sequence | MSTLKLGIAD DHELFRKGFI SMLSGIPDFE FILEAGNGQE LLDRLPANTP DIVFMDLQMP
VMDGIQATEA AFERFPNIKI IVVSMYNEDR FVIHMLEKGV QGYLLKDTSP DEVEKAIRRV
HEEGFYYNDF VSKAMHRKMV NRQVNKHPFF PNACNVALSS REKEVLQLIC DGLSTTEIGD
KLFISVRTVE GHRLRVLEKT GTKSTAAAVA FAYKNQLLS
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