| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2387 |
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| Symbol | |
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| ID | 8358542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2936900 |
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| End bp | 2937523 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964573 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003122079 |
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| Protein GI | 256421426 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.384012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAG TAGTAGTGGT GGAAGACCAC CCGATTATGG TGGAAGGACT GAAGAATATC
CTGCGTAGCG ATGCAGGTAT AGAAGTGAGC GGTGCTTACG GAGATGGTAA AAGTGCATTA
CAGGCGCTTG AAAAAGGACA GCCTGACGTC ATACTGATGG ATGTGAATCT GCCGGATATC
AGTGGTGTAA ACCTCTGTGG TGAAGTGAAG AAAAAATATG AAGATATCAA GATCATAGCG
CTGAGTATAC ATGACGAACA ACCCGTTATC CACAGCATGT TACAGAACGG GGCCAGCGGA
TATGTATTGA AGAATGCATT GGGCAATGAG ATCATCCACG CCATCTATGC GATCATGGAT
GGAGAAGAAT ATCTCTGCAG CAGCACTAAG GAGGCGCTGA AAAATGCAGA CATGGAACTG
TTAAAAGCGA TCCCCCGCAT TACCCGCAGG GAAAAAGAAA TATTACAGCT GATCGGTAAA
GGACTGACGA CCATGCAGAT CGCAGATCAA CTGTTCATCA GTACACATAC AGTGGAAAGT
CACCGTAAGA ACCTGATGGA GAAATTTGGT GTGAATAACA CCACTTCCGT GGTAAAACTG
GCGTCGGAAT ATAAACTGCT TTAA
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| Protein sequence | MIKVVVVEDH PIMVEGLKNI LRSDAGIEVS GAYGDGKSAL QALEKGQPDV ILMDVNLPDI
SGVNLCGEVK KKYEDIKIIA LSIHDEQPVI HSMLQNGASG YVLKNALGNE IIHAIYAIMD
GEEYLCSSTK EALKNADMEL LKAIPRITRR EKEILQLIGK GLTTMQIADQ LFISTHTVES
HRKNLMEKFG VNNTTSVVKL ASEYKLL
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