| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6399 |
|---|
| Symbol | |
|---|
| ID | 8017013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | + |
|---|
| Start bp | 110458 |
|---|
| End bp | 111102 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644828194 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002979394 |
|---|
| Protein GI | 241554181 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.139442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC GCCCGAAAAT CAGGGTGCTC TTGATCGACA ACCACCCGCT GGTGCTGGAC
GGGTTGAAGG CGGTGCTCGA AACATTCGAC CATATCGAAG TTGCCGGCAC GGCCGGGCTC
GCGCAAACGG GGCTGGAGAT CGGCCGGCAA GTTCTGCCGC AGGTCGTGCT GATGGACATC
AACATGCCGA AGCTGAGCGG CATCGATGCG ATCGAGTTGT TCAGGAACGA ACTTCCCCAG
GCGCGGGTCG TGATGCTCTC CATGCATGAC AGCCGCGAGT ATATTTCCTC CTCGGTCATG
CATGGCGCTG CCGGTTACAT CCTGAAGGAC GTTTCGACAG ACGAGATCGT CTCGGCCATC
GAGACCGTAG CGGGCGGGGG GACATATTTC TCGTCCGGCG TCTTCGACGC GCTGATGGGC
GAACGCGCCG AGGAGGGTAG CGATCCCCTG ACCCCGCGCG AACGCGACAT TCTCGGGCTG
ATCGTTGCCG GCAGAAGCAA CAAGGAGATC GCCGAAACGC TCGGGATCAC CTCCGCCACG
GCGGAAACCC ATCGCAAGAA CCTCAAGAAG AAGCTCGGTA TCGCCACCAC AGCGGGCCTC
ATCCGCTATG CGCTCGATCA CGGCATCGTC TCGAAAACCG GGTAA
|
|---|
| Protein sequence | MTERPKIRVL LIDNHPLVLD GLKAVLETFD HIEVAGTAGL AQTGLEIGRQ VLPQVVLMDI
NMPKLSGIDA IELFRNELPQ ARVVMLSMHD SREYISSSVM HGAAGYILKD VSTDEIVSAI
ETVAGGGTYF SSGVFDALMG ERAEEGSDPL TPRERDILGL IVAGRSNKEI AETLGITSAT
AETHRKNLKK KLGIATTAGL IRYALDHGIV SKTG
|
|---|
| |