| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4502 |
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| Symbol | |
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| ID | 8228105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5434083 |
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| End bp | 5434700 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932348 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003088868 |
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| Protein GI | 255038247 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.438194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTCA GAATCCTCAT CGTAGACGAT CACCCGCTGG TTTTGGAAGG ACTTAAATCG
CTGCTTGCCG ACGCGGAGGG CGTGCAGGTC GTAGGCACGG CTACCAATGC GATCGAAGCC
ATTGCATTCC TGAAAGGCAA CGAAGTCGAC ATCGCATTCC TGGACATCAA CCTGCCCGAC
ATCAGCGGCA TTGATCTTTG CAAAAAGGTC AAAGACCAGT TTCCTGAGGT GAAAACACTC
GCATTGAGCA CCTTCAACGA ACGCGCTTAC GTATCGCGCA TGATCCAGAA CGGCGCTTCG
GGCTACCTCA TCAAAAGCTC CGGCAAGGAG GACATCCTCG AAGCCATCGC CCAGGTGCAA
GCCGGGGGTT ATTTCATGAA CGTGCAATTC GATCAGGTAA CGCCCGCCAC CGCTCCGAAA
ACGGTGCCAT TCCTCACCCG CCGCGAAAAG GAAGTTTTGG TACTAATCGC CGAAGGCCTC
ACCAACCCCC AAATCGCCGA ACAACTATTT ATCAGCGTGA CGACGGTAAA TAGCCATCGG
CAGAATTTAC TGATCAAGTT CGAAGTATCG AATACCGCTT CACTGATTAA GTTAGCTGCG
GGGTTGGGGT TGATTTGA
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| Protein sequence | MSVRILIVDD HPLVLEGLKS LLADAEGVQV VGTATNAIEA IAFLKGNEVD IAFLDINLPD
ISGIDLCKKV KDQFPEVKTL ALSTFNERAY VSRMIQNGAS GYLIKSSGKE DILEAIAQVQ
AGGYFMNVQF DQVTPATAPK TVPFLTRREK EVLVLIAEGL TNPQIAEQLF ISVTTVNSHR
QNLLIKFEVS NTASLIKLAA GLGLI
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