| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4551 |
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| Symbol | |
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| ID | 8360724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5687009 |
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| End bp | 5687635 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966706 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003124194 |
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| Protein GI | 256423541 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000124934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0275678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAAGGA TATTTATCAC CGATGATCAC CCGATCGTAC GGGAAGGACT GAAGAATGTA
TTGAATGCCA CGGAAGGATT TGCTGTAACG GGTACCTGCT CCACCGGGAA AGAGACACTG
GAAGCCTTCG AGAAGAAAGA ACCTGATATT TTACTGCTGG ATATTAATCT GCCGGATATC
AATGGCGTAG AGTTGTGTGC AGCGGTAAAG AAGAAACACC CGGACGTATA TGTGATTGCC
CTGAGTGTGC ATAATGAAGC GCCTATCATT AACAGTATTC TCCGGCAGGG GGCCAGTGGC
TATATCCAGA AAAACGCTCT CAGCGAGATC ATTGTGGAGG CTATACAGGA TGTGCTAAAA
GGAGGGAGTT ATGTTTGTGA ACAATCCAGG GAGATCCTGC GGCGTCAGCG TGGTAAAGGC
GGACTGACAC AACTGCCCAA AATGACCCGC AGGGAAAAGG AGATCCTGAA ACTGGCGGCG
GAAGGACTGA CCATAGCACA GATAGCAGAG AAGCTGTTTA TAAGTCCGTA TACGGTGGAA
AGTCACCGGA AGAACCTGAT GGACAAGTTT GAAGTCAATA GTGTGGCGGC AGCTATCAAG
CTGGCCGGGC AATATGGGTT TCTGTGA
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| Protein sequence | MVRIFITDDH PIVREGLKNV LNATEGFAVT GTCSTGKETL EAFEKKEPDI LLLDINLPDI
NGVELCAAVK KKHPDVYVIA LSVHNEAPII NSILRQGASG YIQKNALSEI IVEAIQDVLK
GGSYVCEQSR EILRRQRGKG GLTQLPKMTR REKEILKLAA EGLTIAQIAE KLFISPYTVE
SHRKNLMDKF EVNSVAAAIK LAGQYGFL
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