More than 300 homologs were found in PanDaTox collection
for query gene Cpin_5915 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_5915  two component transcriptional regulator, LuxR family  100 
 
 		 207 aa  424  1e-118  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00974735  normal  1 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  40.58 
 
 		 214 aa  150  1e-35  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  37.62 
 
 		 213 aa  149  2e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  33.18 
 
 		 223 aa  144  6e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  36.19 
 
 		 216 aa  142  3e-33  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.1 
 
 		 213 aa  140  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  35.27 
 
 		 213 aa  137  1e-31  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  35.27 
 
 		 213 aa  137  1e-31  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  37.68 
 
 		 233 aa  137  1e-31  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  36.19 
 
 		 214 aa  136  2e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  33.82 
 
 		 208 aa  137  2e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008255  CHU_1317  response regulator  33.8 
 
 		 220 aa  135  3.0000000000000003e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  36.19 
 
 		 212 aa  135  4e-31  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  35.55 
 
 		 211 aa  133  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  36.18 
 
 		 213 aa  132  3e-30  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  38.97 
 
 		 221 aa  132  5e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.56 
 
 		 218 aa  130  2.0000000000000002e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  35.1 
 
 		 223 aa  129  3e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  129  3e-29  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  129  3e-29  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  129  3e-29  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  36.23 
 
 		 220 aa  129  4.0000000000000003e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  35.51 
 
 		 219 aa  128  5.0000000000000004e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  33.95 
 
 		 222 aa  128  7.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  35.68 
 
 		 215 aa  127  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  34.43 
 
 		 216 aa  126  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  35.92 
 
 		 211 aa  126  2.0000000000000002e-28  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  36.06 
 
 		 220 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  33.97 
 
 		 212 aa  126  3e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  35.41 
 
 		 214 aa  125  3e-28  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  35.35 
 
 		 218 aa  125  4.0000000000000003e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_014230  CA2559_12543  Transcriptional regulator  33.33 
 
 		 207 aa  125  5e-28  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  37.2 
 
 		 219 aa  125  6e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  33.33 
 
 		 216 aa  125  6e-28  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  36.76 
 
 		 203 aa  125  6e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_013216  Dtox_3754  two component transcriptional regulator, LuxR family  36.04 
 
 		 216 aa  125  6e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00290124  normal  1 
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  35.75 
 
 		 213 aa  124  8.000000000000001e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  34.76 
 
 		 224 aa  124  8.000000000000001e-28  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  35.1 
 
 		 1648 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  33.33 
 
 		 217 aa  124  1e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  33.18 
 
 		 212 aa  124  1e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  34.26 
 
 		 219 aa  124  1e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  33.33 
 
 		 206 aa  123  2e-27  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  36.89 
 
 		 219 aa  122  3e-27  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  34.76 
 
 		 224 aa  122  3e-27  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  33.33 
 
 		 205 aa  122  3e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  32.71 
 
 		 215 aa  122  3e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.45 
 
 		 224 aa  122  3e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  31.6 
 
 		 231 aa  122  4e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  33.17 
 
 		 223 aa  122  4e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  36.89 
 
 		 219 aa  122  5e-27  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  34.91 
 
 		 217 aa  121  6e-27  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  35.12 
 
 		 209 aa  121  6e-27  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  34.52 
 
 		 211 aa  121  6e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  35.05 
 
 		 232 aa  120  9.999999999999999e-27  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  32.59 
 
 		 242 aa  120  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  34.43 
 
 		 220 aa  120  9.999999999999999e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.39 
 
 		 222 aa  120  9.999999999999999e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  35.68 
 
 		 222 aa  120  9.999999999999999e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  34.25 
 
 		 236 aa  120  9.999999999999999e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  34.93 
 
 		 217 aa  120  9.999999999999999e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  34.29 
 
 		 224 aa  120  1.9999999999999998e-26  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  34.29 
 
 		 224 aa  120  1.9999999999999998e-26  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  34.1 
 
 		 244 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  34.18 
 
 		 222 aa  119  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal  1 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  32.51 
 
 		 206 aa  120  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  32.71 
 
 		 221 aa  120  1.9999999999999998e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  34.63 
 
 		 214 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  33.65 
 
 		 219 aa  120  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  35.05 
 
 		 232 aa  120  1.9999999999999998e-26  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  34.86 
 
 		 217 aa  119  1.9999999999999998e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  32.2 
 
 		 220 aa  119  3e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.8 
 
 		 221 aa  119  3e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  32.2 
 
 		 211 aa  119  3e-26  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  32.08 
 
 		 206 aa  119  3e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  32.21 
 
 		 214 aa  119  3e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  32.2 
 
 		 214 aa  119  3e-26  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  32.59 
 
 		 242 aa  119  3.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  35.98 
 
 		 225 aa  119  3.9999999999999996e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013730  Slin_6489  two component transcriptional regulator, LuxR family  34.7 
 
 		 219 aa  119  3.9999999999999996e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.324114  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  31.43 
 
 		 221 aa  119  3.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  34.27 
 
 		 219 aa  119  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  32.04 
 
 		 208 aa  119  3.9999999999999996e-26  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  35.05 
 
 		 232 aa  119  3.9999999999999996e-26  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.18 
 
 		 218 aa  118  4.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  32.7 
 
 		 220 aa  118  4.9999999999999996e-26  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  36.41 
 
 		 219 aa  118  6e-26  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  34.8 
 
 		 207 aa  118  6e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  32.57 
 
 		 221 aa  118  6e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  35.21 
 
 		 216 aa  118  6e-26  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  34.8 
 
 		 207 aa  118  6e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  34.29 
 
 		 214 aa  118  6e-26  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33 
 
 		 216 aa  118  6e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  118  6e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  34.18 
 
 		 222 aa  118  7e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  32.86 
 
 		 220 aa  118  7e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  36.41 
 
 		 219 aa  118  7e-26  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  33 
 
 		 214 aa  118  7e-26  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  34.95 
 
 		 211 aa  117  9e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal  1 
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  32.51 
 
 		 218 aa  117  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
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