More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_374 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  100 
 
 		 232 aa  467  1.0000000000000001e-131  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  97.84 
 
 		 232 aa  461  1e-129  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  97.84 
 
 		 232 aa  459  9.999999999999999e-129  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  50.69 
 
 		 224 aa  234  6e-61  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  50.69 
 
 		 224 aa  234  1.0000000000000001e-60  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  50.69 
 
 		 224 aa  234  1.0000000000000001e-60  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  50.69 
 
 		 224 aa  231  7.000000000000001e-60  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  48.34 
 
 		 228 aa  206  4e-52  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  45.12 
 
 		 224 aa  204  7e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  43.66 
 
 		 216 aa  186  3e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  43.6 
 
 		 234 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  42.65 
 
 		 210 aa  180  2e-44  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  43.93 
 
 		 215 aa  179  4e-44  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  43.93 
 
 		 215 aa  178  4.999999999999999e-44  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  43.93 
 
 		 215 aa  178  4.999999999999999e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  43.93 
 
 		 215 aa  178  4.999999999999999e-44  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  43.93 
 
 		 215 aa  178  4.999999999999999e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  43.93 
 
 		 215 aa  178  4.999999999999999e-44  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  43.93 
 
 		 215 aa  178  5.999999999999999e-44  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  42.99 
 
 		 215 aa  178  7e-44  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  42.51 
 
 		 210 aa  178  8e-44  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  42.31 
 
 		 210 aa  178  8e-44  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  42.51 
 
 		 210 aa  177  9e-44  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  42.31 
 
 		 210 aa  177  2e-43  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  42.51 
 
 		 210 aa  176  2e-43  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  41.55 
 
 		 217 aa  176  2e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  42.99 
 
 		 215 aa  176  3e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  42.99 
 
 		 215 aa  176  4e-43  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  44.08 
 
 		 253 aa  175  4e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  43.93 
 
 		 213 aa  175  7e-43  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  39.45 
 
 		 228 aa  174  9.999999999999999e-43  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  45.07 
 
 		 237 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  41.38 
 
 		 208 aa  173  1.9999999999999998e-42  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  42.79 
 
 		 209 aa  172  2.9999999999999996e-42  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  43.6 
 
 		 217 aa  173  2.9999999999999996e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  42.01 
 
 		 223 aa  171  9e-42  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  41.63 
 
 		 216 aa  171  1e-41  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  42.65 
 
 		 234 aa  171  1e-41  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  43.4 
 
 		 221 aa  170  2e-41  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  43.54 
 
 		 227 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  43.26 
 
 		 212 aa  170  2e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  42.66 
 
 		 236 aa  170  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  41.23 
 
 		 210 aa  169  2e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  42.65 
 
 		 222 aa  169  3e-41  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  44.6 
 
 		 237 aa  169  3e-41  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.64 
 
 		 221 aa  169  3e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  42.65 
 
 		 219 aa  168  5e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  44.5 
 
 		 207 aa  168  5e-41  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  41.71 
 
 		 207 aa  168  6e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.09 
 
 		 222 aa  167  1e-40  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  40.27 
 
 		 220 aa  167  2e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  39.55 
 
 		 213 aa  166  2.9999999999999998e-40  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  39.63 
 
 		 214 aa  166  2.9999999999999998e-40  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  43.81 
 
 		 303 aa  166  2.9999999999999998e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.4 
 
 		 226 aa  166  4e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.82 
 
 		 226 aa  166  4e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.91 
 
 		 223 aa  165  5e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.78 
 
 		 219 aa  165  5e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  39.55 
 
 		 224 aa  165  5.9999999999999996e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  42.72 
 
 		 224 aa  165  6.9999999999999995e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  41.18 
 
 		 225 aa  164  8e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  41.51 
 
 		 221 aa  164  1.0000000000000001e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  39.37 
 
 		 215 aa  164  1.0000000000000001e-39  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  43.06 
 
 		 218 aa  164  1.0000000000000001e-39  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  41.7 
 
 		 226 aa  164  2.0000000000000002e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  39.07 
 
 		 213 aa  163  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  37.44 
 
 		 229 aa  163  2.0000000000000002e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  39.01 
 
 		 242 aa  162  3e-39  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  40.67 
 
 		 206 aa  162  4.0000000000000004e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  40.93 
 
 		 226 aa  162  4.0000000000000004e-39  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  40.85 
 
 		 218 aa  162  4.0000000000000004e-39  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.28 
 
 		 226 aa  162  4.0000000000000004e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  41.78 
 
 		 220 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  40 
 
 		 226 aa  162  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  41.79 
 
 		 209 aa  162  5.0000000000000005e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  40.87 
 
 		 219 aa  162  6e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  39.73 
 
 		 218 aa  161  6e-39  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  37.09 
 
 		 216 aa  161  7e-39  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  35.75 
 
 		 226 aa  161  9e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  39.71 
 
 		 218 aa  161  9e-39  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  41.18 
 
 		 225 aa  161  9e-39  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  37.96 
 
 		 234 aa  160  1e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  41.94 
 
 		 211 aa  160  1e-38  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  37.74 
 
 		 232 aa  160  1e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  43.4 
 
 		 213 aa  161  1e-38  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  40.19 
 
 		 225 aa  160  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  38.79 
 
 		 220 aa  160  1e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  40.19 
 
 		 214 aa  160  2e-38  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  39.07 
 
 		 221 aa  160  2e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  43.84 
 
 		 213 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.96 
 
 		 213 aa  159  2e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  39.63 
 
 		 227 aa  160  2e-38  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  39.73 
 
 		 230 aa  160  2e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  41.86 
 
 		 212 aa  160  2e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  41.36 
 
 		 227 aa  159  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
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