| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0432 |
|---|
| Symbol | |
|---|
| ID | 3230235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 406733 |
|---|
| End bp | 407431 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637119998 |
|---|
| Product | LuxR family DNA-binding response regulator |
|---|
| Protein accession | YP_181176 |
|---|
| Protein GI | 57234766 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00543066 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA CCAAAGTCCT GATAGCTGAT GATCATGCAG TCCTTAGAGA AGGTATGAGC
CGATTGTTAA GCCAGGAAAA AGACATTGAA GTAGTCGGCG AAGCCGGAGA CGGGCAGGAA
GCCGTTGATA TGGTAGGCCA GTTCAAACCG GACGTAGTCC TTATGGACAT AGTCATGCCC
AGACTAACCG GGGTGGAAGC AACCAAGCTT ATCAAAAAAA ATAACCCTTC CACCTGTATC
CTAATACTTA CGGCATATAG CGATATCCGT TATATACTGG GCCTGCTTGA GGCCGGGGCC
AGCGGTTACC TGCTGAAAAG CGCCAAAAGC GACGAGATTG TAGGGGCTAT CAGAGCTATA
AAAGCGGGTG AATCCGTACT GGATTCCATA GCCACCAGGA AACTGCTGGA ACGGGTGGTA
AACGTAAGCA AGGAAACTGA TGAAGATAAA GTCCGCGGTC AGCTCTCCCC CCGGGAGATT
GAAATACTCC AGCTGGCATC TAAAGGCCTT AGCAACCGCG AAATAGCCGA TAAACTAGAA
CTGTCCATGC GGACTGTAAA AGCCCACCTT TCAAATATAT TTAACAAAAT GCGCTGCAGC
TGCCGTACCG AAGCTATTGT CAAAGGTTTT CGCGAAGGTT ATGTAATGCT GGAAGACGTA
CCTCAGGGGA TAGACGGATA TGACCGAAAC ACGCTTTAA
|
|---|
| Protein sequence | MAKTKVLIAD DHAVLREGMS RLLSQEKDIE VVGEAGDGQE AVDMVGQFKP DVVLMDIVMP
RLTGVEATKL IKKNNPSTCI LILTAYSDIR YILGLLEAGA SGYLLKSAKS DEIVGAIRAI
KAGESVLDSI ATRKLLERVV NVSKETDEDK VRGQLSPREI EILQLASKGL SNREIADKLE
LSMRTVKAHL SNIFNKMRCS CRTEAIVKGF REGYVMLEDV PQGIDGYDRN TL
|
|---|
| |