| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0409 |
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| Symbol | |
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| ID | 5131129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 414532 |
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| End bp | 415230 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529311 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001213872 |
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| Protein GI | 147669054 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.135269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA CCAAAGTCTT GATAGCTGAT GATCATGCAG TCCTTAGGGA AGGTATGAGC
CGATTGTTAA GTCAGGAAAA AGACATAGAA GTAATCGGCG AAGCCGGAGA CGGGCAAGAA
GCGGTTGATA TGGTAGCCCA GCTTAAACCG GACGTAGTCC TTATGGACAT AGTCATGCCC
AGACTAACAG GGGTGGAAGC AACCAAACTT ATCAAGAAAA ATAACCCTTC CACCTGTATC
CTAATACTTA CGGCCTATAG CGATATCCGC TATATACTCG GTTTGCTTGA AGCCGGAGCC
AGCGGTTACC TGCTGAAAAG TGCGAAAAGC GACGAGATTG TGGGGGCTAT CAGAGCTATA
AAAGCCGGCG AATCCGTACT GGATTCAGTT GCCACCCGAA AACTGCTGGA ACGGGTAGTA
AATGTGAGCA AGGAATCTGA CGAAGATAAA GTCCGCGGCC AACTCTCCCC GCGTGAGATT
GAAATACTCC AGCTGGCATC AAAAGGCCTG AGTAACCGCG AAATTGCTGA TAAACTGACC
CTGTCCATGC GGACAGTAAA AGCCCACCTT TCAAATATAT TTAACAAAAT GCGCTGCAGT
TGCCGCACCG AAGCCATTGT CAAAGGCTTT CGCGAAGGTT ATGTAATGCT GGAAGATGTA
CCTCAGGGGA TAGACGGCTA TGACCGAAAC ACGCTTTAA
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| Protein sequence | MAKTKVLIAD DHAVLREGMS RLLSQEKDIE VIGEAGDGQE AVDMVAQLKP DVVLMDIVMP
RLTGVEATKL IKKNNPSTCI LILTAYSDIR YILGLLEAGA SGYLLKSAKS DEIVGAIRAI
KAGESVLDSV ATRKLLERVV NVSKESDEDK VRGQLSPREI EILQLASKGL SNREIADKLT
LSMRTVKAHL SNIFNKMRCS CRTEAIVKGF REGYVMLEDV PQGIDGYDRN TL
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