| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1284 |
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| Symbol | |
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| ID | 6207422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1592121 |
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| End bp | 1592750 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690925 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001818169 |
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| Protein GI | 182413103 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.479266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTC CCGCCAAGCT TCGGATCCTC GTGGCCGATG ATCATTTCAT CGTCCGCAGC
GGGCTGGTGT CGTTGATCCA CGCGGAACCC GACATGAGCG TCGTCGCCCA GGCGGCCGAC
GGCGCGGAAG CCGTGGCGCT GTTCACGCAG CACCAGCCGG ACGTGGCGTT GCTCGATTTG
CGCATGCCGG TGCGCAGCGG CACGGAGGCG ATCGAGCAGA TCCGCCGCGA TCATCCGCAC
GCGCGCATTC TCGTGCTGAC GGCCTTCAGC GGTGACGAAG ACATCCGCAA AGCACTCCGT
GCCGGCGCGC GCGGCTACGT CCTGAAAAGC TCCACCGGCG AAGGATTGAT CCCCGCGATC
CGCGCCGTCG CCGCGGGCGA ACCCTGGATT CCCAACGACG TCGCGACTCG GCTCGCGATG
CGCAGTTCCT ACGAGGAACT CACCAGTCGC GAAATCCAGG TCCTGCAGGA GATCGCCAAG
GGCAAGGCGA ACAAGGAAAT CGCGGCCGTG CTCGCGATTT CTGAATACAC GGTGAAGGAC
CACCTCAAGA ACATCATGGG CAAGCTGCAC GTGGCGGTCC GCACCGAGGC CGTCACCGCC
GCCGTCCAGC GCGGAATCAT CGAACTCTAG
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| Protein sequence | MSRPAKLRIL VADDHFIVRS GLVSLIHAEP DMSVVAQAAD GAEAVALFTQ HQPDVALLDL
RMPVRSGTEA IEQIRRDHPH ARILVLTAFS GDEDIRKALR AGARGYVLKS STGEGLIPAI
RAVAAGEPWI PNDVATRLAM RSSYEELTSR EIQVLQEIAK GKANKEIAAV LAISEYTVKD
HLKNIMGKLH VAVRTEAVTA AVQRGIIEL
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