Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1846 |
Symbol | |
ID | 8544228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2543723 |
End bp | 2544361 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646386552 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003266287 |
Protein GI | 262195078 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.349565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.2019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAAA TCGCCATTGC AGACGACCAC GCATTATTAC GTGAAGGCAT GCGCCGCATG CTCTCCCAGA GCGAACTCAT CGAGGTCGTC GGGGAAGCAT CCAACGGCGC CGAGGCGGTC GAGGTGGTGA AGGAAAAAGC CCCCGACGTG CTGCTGCTCG ATATCACGAT GCCGGTGAAG GACGGTATCG AGGCCACCGC CGATATCCTC GCGCTCAACG TCAACACCAA GATCCTGATC CTGTCGATGC ACGCCGACGA GCAGTACGCG CTGCGCACGC TGCGCGCGGG AGCAAACGGC TTCATCAGCA AGGGCGCGCG CCTCGAGGAG CTGCTCAAGG CCATCACCGA TGTGCACGAG GGTCAGCGCT ACCTGCCCGA CAAGATCGCG ACCTCCTTTG CCGAGCGGCA CATCCGCCCC GACGCCGAGA AGCCCCTGGT CGAGACCCTG TCCAAGCGCG AGTTCCAGGT GATGACGCAC CTGGCGCAGG GCATGACCAA CCGCGAGATC GCCGGGGTGC TGCAGATCAG CGTGAAGACC GTGGACACCC ACCGCAGCCA CGTGCTCAAG AAGCTCGAGC TGCGCAACAA CTCGGACATC ACGCGCTTCG CCATCCAGCA CGGCTACATT CAGTTCTGA
|
Protein sequence | MIKIAIADDH ALLREGMRRM LSQSELIEVV GEASNGAEAV EVVKEKAPDV LLLDITMPVK DGIEATADIL ALNVNTKILI LSMHADEQYA LRTLRAGANG FISKGARLEE LLKAITDVHE GQRYLPDKIA TSFAERHIRP DAEKPLVETL SKREFQVMTH LAQGMTNREI AGVLQISVKT VDTHRSHVLK KLELRNNSDI TRFAIQHGYI QF
|
| |