More than 300 homologs were found in PanDaTox collection
for query gene Cpin_2907 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  100 
 
 		 222 aa  452  1.0000000000000001e-126  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_013037  Dfer_2963  two component transcriptional regulator, LuxR family  46.76 
 
 		 219 aa  197  1.0000000000000001e-49  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  42.92 
 
 		 219 aa  182  3e-45  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.21854 
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  43.78 
 
 		 219 aa  174  7e-43  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.715181 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  38.53 
 
 		 221 aa  163  2.0000000000000002e-39  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  37.16 
 
 		 219 aa  154  2e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  37.44 
 
 		 219 aa  152  2.9999999999999998e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  33.8 
 
 		 220 aa  152  4e-36  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35 
 
 		 221 aa  150  2e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.26 
 
 		 216 aa  150  2e-35  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  34.6 
 
 		 218 aa  149  4e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  36.87 
 
 		 239 aa  149  4e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  35.38 
 
 		 213 aa  148  6e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.33 
 
 		 216 aa  147  1.0000000000000001e-34  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  35.07 
 
 		 210 aa  147  1.0000000000000001e-34  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  34.7 
 
 		 217 aa  147  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  34.88 
 
 		 224 aa  147  1.0000000000000001e-34  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  37.21 
 
 		 234 aa  147  1.0000000000000001e-34  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  33.64 
 
 		 217 aa  147  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013132  Cpin_0010  two component transcriptional regulator, LuxR family  35.85 
 
 		 219 aa  147  2.0000000000000003e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.11 
 
 		 216 aa  145  3e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  34.6 
 
 		 210 aa  146  3e-34  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  34.7 
 
 		 215 aa  146  3e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  33.33 
 
 		 233 aa  145  5e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  34.43 
 
 		 210 aa  145  5e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  34.6 
 
 		 210 aa  145  6e-34  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.12 
 
 		 215 aa  145  7.0000000000000006e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.48 
 
 		 220 aa  144  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  36.92 
 
 		 209 aa  144  1e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  35.02 
 
 		 213 aa  143  2e-33  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  33.18 
 
 		 228 aa  144  2e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  32.57 
 
 		 218 aa  142  3e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  32.41 
 
 		 261 aa  142  4e-33  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  37.85 
 
 		 216 aa  142  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  36.24 
 
 		 214 aa  142  4e-33  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.19 
 
 		 213 aa  142  5e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  34.71 
 
 		 248 aa  142  5e-33  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  36.41 
 
 		 220 aa  142  5e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.6 
 
 		 213 aa  141  7e-33  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  36.02 
 
 		 206 aa  141  8e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  33.92 
 
 		 242 aa  140  9.999999999999999e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_012803  Mlut_02970  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.33 
 
 		 227 aa  140  9.999999999999999e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  0.611463  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  36.32 
 
 		 210 aa  140  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  30.66 
 
 		 231 aa  140  9.999999999999999e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  34.72 
 
 		 221 aa  140  9.999999999999999e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.09 
 
 		 230 aa  140  9.999999999999999e-33  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.8 
 
 		 232 aa  140  9.999999999999999e-33  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.11 
 
 		 215 aa  140  9.999999999999999e-33  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  32.58 
 
 		 213 aa  140  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  33.18 
 
 		 219 aa  140  1.9999999999999998e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  32.52 
 
 		 217 aa  140  1.9999999999999998e-32  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.57 
 
 		 234 aa  139  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  34.91 
 
 		 210 aa  140  1.9999999999999998e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  36.32 
 
 		 210 aa  140  1.9999999999999998e-32  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  31.94 
 
 		 218 aa  139  1.9999999999999998e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  33.03 
 
 		 220 aa  140  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  34.09 
 
 		 218 aa  139  3e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  32.41 
 
 		 218 aa  139  3e-32  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  36.32 
 
 		 210 aa  139  3e-32  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.6 
 
 		 216 aa  139  3e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  32.87 
 
 		 232 aa  139  3.9999999999999997e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  34.58 
 
 		 215 aa  139  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  32.56 
 
 		 212 aa  139  3.9999999999999997e-32  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  33.33 
 
 		 232 aa  139  3.9999999999999997e-32  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  34.29 
 
 		 213 aa  138  4.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  33.18 
 
 		 214 aa  139  4.999999999999999e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  33.64 
 
 		 216 aa  138  4.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  33.18 
 
 		 222 aa  138  6e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  34.43 
 
 		 210 aa  138  6e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  33.95 
 
 		 215 aa  138  6e-32  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  36.41 
 
 		 218 aa  138  6e-32  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.86 
 
 		 215 aa  138  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  31.48 
 
 		 217 aa  138  7e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_014230  CA2559_12543  Transcriptional regulator  34.78 
 
 		 207 aa  138  7.999999999999999e-32  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  34.11 
 
 		 215 aa  137  8.999999999999999e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  34.11 
 
 		 215 aa  137  8.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  34.11 
 
 		 215 aa  137  8.999999999999999e-32  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.8 
 
 		 242 aa  137  8.999999999999999e-32  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  34.11 
 
 		 215 aa  137  8.999999999999999e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  32.44 
 
 		 234 aa  137  8.999999999999999e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  34.11 
 
 		 215 aa  137  8.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  34.56 
 
 		 212 aa  137  1e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  35.18 
 
 		 218 aa  137  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  34.11 
 
 		 215 aa  137  1e-31  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  35.24 
 
 		 215 aa  137  1e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal  1 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.65 
 
 		 217 aa  137  1e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.65 
 
 		 217 aa  137  1e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  33.64 
 
 		 215 aa  137  1e-31  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.56 
 
 		 239 aa  137  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  34.91 
 
 		 209 aa  137  2e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  34.43 
 
 		 212 aa  137  2e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  34.72 
 
 		 215 aa  137  2e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  35.35 
 
 		 218 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
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