More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4551 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  100 
 
 		 208 aa  424  1e-118  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  50.48 
 
 		 207 aa  228  7e-59  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  47.8 
 
 		 207 aa  206  2e-52  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.126193 
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  47.34 
 
 		 205 aa  180  1e-44  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  44.83 
 
 		 211 aa  165  4e-40  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal  1 
 
 
-
 
NC_013132  Cpin_4278  two component transcriptional regulator, LuxR family  39.13 
 
 		 213 aa  160  9e-39  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.0894003 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  42.51 
 
 		 206 aa  157  9e-38  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  37.38 
 
 		 217 aa  143  2e-33  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_1440  two component transcriptional regulator, LuxR family  37.13 
 
 		 208 aa  140  9.999999999999999e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.2 
 
 		 213 aa  139  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  34.12 
 
 		 214 aa  139  3e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  37.96 
 
 		 220 aa  139  3.9999999999999997e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  36.36 
 
 		 211 aa  139  3.9999999999999997e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  36.7 
 
 		 224 aa  138  4.999999999999999e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.3 
 
 		 206 aa  138  7e-32  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.71 
 
 		 213 aa  137  8.999999999999999e-32  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_6527  two component transcriptional regulator, LuxR family  33.64 
 
 		 215 aa  137  8.999999999999999e-32  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  35.92 
 
 		 220 aa  137  8.999999999999999e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  35.64 
 
 		 211 aa  137  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  35.24 
 
 		 223 aa  136  2e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  36.23 
 
 		 213 aa  136  2e-31  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  35.96 
 
 		 213 aa  135  3.0000000000000003e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  35.35 
 
 		 224 aa  135  4e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  33.81 
 
 		 206 aa  135  5e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.29 
 
 		 224 aa  135  5e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.74 
 
 		 232 aa  134  7.000000000000001e-31  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  35.68 
 
 		 222 aa  134  8e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.92 
 
 		 213 aa  134  8e-31  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  37.32 
 
 		 216 aa  134  9.999999999999999e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  34.27 
 
 		 232 aa  134  9.999999999999999e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  34.74 
 
 		 232 aa  134  9.999999999999999e-31  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  33.01 
 
 		 213 aa  133  1.9999999999999998e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.3 
 
 		 233 aa  133  1.9999999999999998e-30  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  35.02 
 
 		 228 aa  133  1.9999999999999998e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.64 
 
 		 216 aa  133  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  32.7 
 
 		 234 aa  132  1.9999999999999998e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  32.71 
 
 		 229 aa  132  3e-30  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  35.44 
 
 		 208 aa  132  3e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  38.54 
 
 		 210 aa  132  3.9999999999999996e-30  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal  1 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  36.67 
 
 		 216 aa  132  5e-30  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  35.89 
 
 		 215 aa  131  6e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  33.5 
 
 		 212 aa  131  9e-30  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  30.77 
 
 		 210 aa  131  9e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  35.62 
 
 		 225 aa  130  1.0000000000000001e-29  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  31.58 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  34.78 
 
 		 217 aa  130  1.0000000000000001e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  33.49 
 
 		 225 aa  130  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  36.1 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  32.35 
 
 		 211 aa  129  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  31.1 
 
 		 214 aa  129  3e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  35.61 
 
 		 215 aa  129  4.0000000000000003e-29  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  35.75 
 
 		 213 aa  129  4.0000000000000003e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34.65 
 
 		 216 aa  128  6e-29  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  32.85 
 
 		 216 aa  128  6e-29  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  31.25 
 
 		 210 aa  128  7.000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  32.84 
 
 		 214 aa  127  8.000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  35.61 
 
 		 214 aa  127  9.000000000000001e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  33.33 
 
 		 222 aa  127  9.000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2713  two component LuxR family transcriptional regulator  35.47 
 
 		 216 aa  127  9.000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  32.85 
 
 		 214 aa  127  9.000000000000001e-29  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  35.61 
 
 		 214 aa  127  9.000000000000001e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  35.61 
 
 		 214 aa  127  9.000000000000001e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.6 
 
 		 218 aa  127  9.000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  34.83 
 
 		 213 aa  127  1.0000000000000001e-28  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  32.38 
 
 		 211 aa  127  1.0000000000000001e-28  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  33.98 
 
 		 223 aa  127  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  34.83 
 
 		 213 aa  127  1.0000000000000001e-28  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  29.86 
 
 		 215 aa  127  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  32.38 
 
 		 216 aa  126  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  37.31 
 
 		 215 aa  127  2.0000000000000002e-28  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  33.17 
 
 		 220 aa  126  2.0000000000000002e-28  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  35.1 
 
 		 223 aa  126  3e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  34.78 
 
 		 214 aa  125  3e-28  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  126  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_012880  Dd703_2482  two component transcriptional regulator, LuxR family  33.81 
 
 		 211 aa  125  3e-28  Dickeya dadantii Ech703  Bacteria  normal  0.46622  n/a   
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  34.3 
 
 		 214 aa  125  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.74 
 
 		 215 aa  125  4.0000000000000003e-28  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  125  4.0000000000000003e-28  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  31.1 
 
 		 214 aa  125  4.0000000000000003e-28  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.12 
 
 		 215 aa  125  5e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  32.35 
 
 		 214 aa  124  7e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  30.09 
 
 		 221 aa  124  8.000000000000001e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  33.33 
 
 		 211 aa  124  8.000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0833  response regulator  29.67 
 
 		 227 aa  124  9e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_011312  VSAL_I2141  response regulator  30.14 
 
 		 214 aa  124  9e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  30.7 
 
 		 234 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  35.71 
 
 		 222 aa  124  1e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_003910  CPS_3271  response regulator  30.14 
 
 		 214 aa  123  2e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.73 
 
 		 222 aa  123  2e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_012917  PC1_2202  two component transcriptional regulator, LuxR family  33.51 
 
 		 213 aa  123  2e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  32.68 
 
 		 212 aa  123  2e-27  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  31.43 
 
 		 215 aa  123  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  32.04 
 
 		 222 aa  123  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_013132  Cpin_2103  two component transcriptional regulator, LuxR family  32.38 
 
 		 210 aa  122  3e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
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