| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1954 |
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| Symbol | |
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| ID | 7084422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2197870 |
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| End bp | 2198532 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698979 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002355601 |
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| Protein GI | 217970367 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTGC GCATCCTGCT TGCCGACGAC CACCAGATGT TCCGCCACGC GCTGCGGGCG
CTGCTCGCCC GCGACCCGGA GCTCGAAGTG GTCGCCGAGG CGGCGAGTGG CGAGGAGGTG
CTCGCGATCG CCGATGCCCA GCCGGTCGAC CTCGTGTGCA TGGACATCGC CATGCCGGGC
ATGGACGGCA TCGAGGCCAC CCGCCGCCTG CTCGCCCGCC ATCCGGCGCT GCGCGTGATC
GGCCTTTCGG CCTTCGCCGA CCGCCAGTTC GTGACCGACC TGCTCGCCGC CGGCGCGCGC
GGCTACATCA CCAAGGGCGA AGCCGGCGAC GAGCTGCTGC GCGCGATCCG CACCGTGTGC
GAGGGGCGCA GCTACCTGTG CCCCGAGGTC GCGGCGACGG TCGCGGATGC ACTGCGCGAC
AGCCCCGGGG TGTACGCCGC CGCACCCCGG CTCACCGCGC GCGAGCGCCA GGTGCTGCAG
CTGATCGCCG AAGGCCTGAC CTCGGTGCAG ATCGGCGATC GCCTGCACAT CGCCGCCTCC
ACGGTCGAGG TGCACCGCCG CAACCTGATG CGCAAGCTCG ACCTGCACAA CGTTGCCGAA
CTCACCCGCT ACGCGATCCA CAGCGGCATC AGCCCGAGCG CGAGCCCGGG CGGCGCGGCT
TGA
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| Protein sequence | MSLRILLADD HQMFRHALRA LLARDPELEV VAEAASGEEV LAIADAQPVD LVCMDIAMPG
MDGIEATRRL LARHPALRVI GLSAFADRQF VTDLLAAGAR GYITKGEAGD ELLRAIRTVC
EGRSYLCPEV AATVADALRD SPGVYAAAPR LTARERQVLQ LIAEGLTSVQ IGDRLHIAAS
TVEVHRRNLM RKLDLHNVAE LTRYAIHSGI SPSASPGGAA
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