| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1950 |
|---|
| Symbol | |
|---|
| ID | 6872529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1881182 |
|---|
| End bp | 1881820 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642785072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002215738 |
|---|
| Protein GI | 198243723 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0094858 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAT ATAAGATCTT ATTAGTAGAC GATCATGAAA TCATCATTAA CGGCATTATG
AATGCCTTAT TACCCTGGCC TCATTTTAAA ATTGTAGAGC ATGTTAAAAA TGGTCTTGAG
GTTTATAATG CCTGTTGCGC ATACGAGCCT GACATACTTA TCCTTGATCT TAGCTTACCT
GGCATCAATG GCCTGGATAT CATTCCTCAA TTACATCAGC GTTGGCCAGC AATGAATATT
CTGGTTTACA CAGCATACCA ACAAGAGTAT ATGACCATTA AAACTTTAGC CGCAGGTGCT
AATGGCTATG TTTTAAAAAG CAGTAGTCAG CAAGTTCTGT TAGCGGCATT GCAAACAGTA
GCAGTAAACA AGCGTTACAT TGACCCAACG TTGAATCGGG AAGCTATCCT GGCTGAATTA
AACGCTGACA CGACCAATCA TCAACTGCTT ACTTTGCGCG AGCGTCAGGT TCTTAAACTT
ATTGACGAGG GGTATACCAA TCATGGGATC AGCGAAAAGC TACATATCAG TATAAAAACC
GTCGAAACAC ACCGGATGAA TATGATGAGA AAGCTACAGG TTCATAAAGT GACAGAGTTA
CTTAACTGTG CCCGAAGAAT GAGGTTAATA GAGTATTAA
|
|---|
| Protein sequence | MKEYKILLVD DHEIIINGIM NALLPWPHFK IVEHVKNGLE VYNACCAYEP DILILDLSLP
GINGLDIIPQ LHQRWPAMNI LVYTAYQQEY MTIKTLAAGA NGYVLKSSSQ QVLLAALQTV
AVNKRYIDPT LNREAILAEL NADTTNHQLL TLRERQVLKL IDEGYTNHGI SEKLHISIKT
VETHRMNMMR KLQVHKVTEL LNCARRMRLI EY
|
|---|
| |