| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5476 |
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| Symbol | |
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| ID | 8361653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6985293 |
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| End bp | 6985952 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967622 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003125106 |
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| Protein GI | 256424453 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.21854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACA ACATTAAGGT GGCTATTGCC GATGATCATA AGATCTTCCG CAGCGGTGTT
ATTAATACCC TCACCCCCTA CGAGAATATA ACTGTGGTGT TTGAAGCTGA AGATGGGGCC
CACCTGCTGG AGATAATGGA AGAGCAACAG CCTGATGTTA TCCTGATGGA CCTGAAAATG
CCCAATATGG ACGGCATTGA AGCCACCAAA AAAGTGCGTG AAAAATACGC CAATGTTAAA
GTAATCGTAC TAACCATGTA CGAAGACGAT AACTTCATTG TACACCTCAT TGAAAACGGC
GCTAACGCCT ATCTGCTGAA AAATGCAGAA CCTAATGAGA TATACGAAGC CATCTGCACG
ACCTACGAAA AAGGGTTCTA CTTCAATGAA AATGTGAACC TGGCCCTGCT CAAAAAAGTC
ATGCACAAAA ACAAACAGCA CTTCAAGCCC ACTTTCAGAA ATGAAGTGCA GCTCACCGAC
CGTGAGCTCG AAGTACTGCG CCTTATCTGT AATGAACACA CCACCCAGGA AATATCTAAA
GAAATATTCC TGAGCCCGCG TACTGTAGAA GGCCTCCGGC AGAAACTCCT GGAAAAAACA
GGCGCTAAAA ATATCGTCGG CCTGGTCATG CACGCTTTCA GAAACGGAAT AATTGAATGA
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| Protein sequence | MVNNIKVAIA DDHKIFRSGV INTLTPYENI TVVFEAEDGA HLLEIMEEQQ PDVILMDLKM
PNMDGIEATK KVREKYANVK VIVLTMYEDD NFIVHLIENG ANAYLLKNAE PNEIYEAICT
TYEKGFYFNE NVNLALLKKV MHKNKQHFKP TFRNEVQLTD RELEVLRLIC NEHTTQEISK
EIFLSPRTVE GLRQKLLEKT GAKNIVGLVM HAFRNGIIE
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