| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4278 |
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| Symbol | |
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| ID | 8360451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5341786 |
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| End bp | 5342427 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644966440 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003123928 |
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| Protein GI | 256423275 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0894003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCATA ATAATCATAA AATCAGTATT GCTATTGTAG ATGATCATCC TATTGTGATA
GAGGGATTCA GATCATTGCT GGAGAGCAGT CCGCTGTATG AGATTGCTGG TTGTTTTACT
ACCGGTGCCG GTTGTATGGG TTTTCTGCAA CAACACAAAG CAGACATTGT ATTGTTGGAC
ATCACCTTGC CGGATGGCAA CGGCGTTCAT TTTTGTGCTG TCATCAATGA GTTTTATCCG
GACACAATGG TTGTCGCCCT TAGTAACCTG AATGAGCGAA GCATTATTTC GCAGCTATTC
AAAAATGGAG CGAAGGGTTA TCTACTTAAA AACATCTCCG CCAAAGAGTT ATTAGATGCA
TTAAATACGG TTTGGGAAGG TAACATTGCG ATGAGTCCGG AGGTGAAAGA GATCATGCAA
CAACCTGATC TTAATACTTT ACAGACGATA CCGGAGCTGA CTAAAAGAGA AAAACAGATC
CTGCAATTGT TGGCCGAGGG CAGAAAATCA GCCGCTATTG CGGAAGAGTT GTTTATCAGT
CCGCTAACGG TTAAAACACA TCGTGCTACC TTGCTGCACA AATTTCAGGT GAGTAATATT
GTTACATTGG TTAACCGGGC TAAAGAGACT GGTTTGATCT AA
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| Protein sequence | MLHNNHKISI AIVDDHPIVI EGFRSLLESS PLYEIAGCFT TGAGCMGFLQ QHKADIVLLD
ITLPDGNGVH FCAVINEFYP DTMVVALSNL NERSIISQLF KNGAKGYLLK NISAKELLDA
LNTVWEGNIA MSPEVKEIMQ QPDLNTLQTI PELTKREKQI LQLLAEGRKS AAIAEELFIS
PLTVKTHRAT LLHKFQVSNI VTLVNRAKET GLI
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