More than 300 homologs were found in PanDaTox collection
for query gene Bfae_00310 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
213 aa  411  1e-114  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  55.45 
 
 
222 aa  229  2e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  56.87 
 
 
207 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.28 
 
 
209 aa  210  2e-53  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  56.54 
 
 
218 aa  207  8e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  50.24 
 
 
205 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  51.53 
 
 
208 aa  191  6e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  52.83 
 
 
209 aa  191  7e-48  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  47.87 
 
 
207 aa  190  1e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  51.18 
 
 
206 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  51.17 
 
 
220 aa  188  5.999999999999999e-47  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  50 
 
 
212 aa  187  7e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  49.06 
 
 
211 aa  186  2e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  50 
 
 
207 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  51.28 
 
 
208 aa  184  6e-46  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  48.62 
 
 
222 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  53.52 
 
 
208 aa  182  3e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  50 
 
 
211 aa  182  4.0000000000000006e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013235  Namu_3632  two component transcriptional regulator, LuxR family  52.11 
 
 
209 aa  182  4.0000000000000006e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00835522  normal  0.0174868 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  50 
 
 
216 aa  181  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  48.37 
 
 
209 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  49.28 
 
 
212 aa  176  2e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  49.3 
 
 
212 aa  175  5e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  51.42 
 
 
211 aa  171  7.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  48.84 
 
 
209 aa  171  9e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  47.21 
 
 
214 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  45.02 
 
 
234 aa  168  5e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  47.42 
 
 
207 aa  167  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  45.37 
 
 
213 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  43.52 
 
 
228 aa  165  5e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  46.95 
 
 
210 aa  164  6.9999999999999995e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  45.02 
 
 
217 aa  163  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  45.54 
 
 
206 aa  158  7e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  43.56 
 
 
221 aa  154  1e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  44.78 
 
 
215 aa  153  2e-36  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  38.5 
 
 
209 aa  152  2.9999999999999998e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  47.55 
 
 
209 aa  152  5e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  40.98 
 
 
213 aa  151  8e-36  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  38.97 
 
 
218 aa  150  1e-35  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  42.45 
 
 
213 aa  149  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  39.23 
 
 
222 aa  150  2e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  45.41 
 
 
209 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  40.89 
 
 
212 aa  149  4e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.21 
 
 
219 aa  149  4e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  45.58 
 
 
217 aa  149  4e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  42.72 
 
 
217 aa  148  5e-35  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  39.5 
 
 
209 aa  148  6e-35  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  44.6 
 
 
227 aa  148  6e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  39.5 
 
 
209 aa  148  6e-35  Yersinia pestis Angola  Bacteria  normal  normal  0.0858473 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  36.49 
 
 
207 aa  148  6e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  36.49 
 
 
207 aa  148  6e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  39.5 
 
 
209 aa  147  9e-35  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  41.15 
 
 
222 aa  147  9e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  40.09 
 
 
217 aa  146  2.0000000000000003e-34  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  41.04 
 
 
224 aa  145  4.0000000000000006e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  40.83 
 
 
218 aa  145  5e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  41.2 
 
 
218 aa  145  6e-34  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.6 
 
 
226 aa  144  7.0000000000000006e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.46 
 
 
214 aa  144  8.000000000000001e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  36.57 
 
 
212 aa  144  9e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  41.01 
 
 
226 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  41.29 
 
 
208 aa  144  1e-33  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  40 
 
 
229 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  40.64 
 
 
216 aa  143  2e-33  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.15 
 
 
221 aa  142  3e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  41.63 
 
 
220 aa  142  3e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  40.35 
 
 
226 aa  142  3e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  40.43 
 
 
227 aa  142  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  38.65 
 
 
211 aa  142  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  40 
 
 
230 aa  142  3e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  40.37 
 
 
221 aa  142  4e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  40.43 
 
 
226 aa  142  4e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  38.74 
 
 
224 aa  142  4e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  40.74 
 
 
218 aa  142  5e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.03 
 
 
223 aa  141  6e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35.41 
 
 
224 aa  141  6e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.12 
 
 
223 aa  141  6e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  38.83 
 
 
221 aa  141  8e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  37.38 
 
 
213 aa  141  8e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.66 
 
 
221 aa  141  8e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009456  VC0395_0613  nitrate/nitrite response regulator NarP  42.92 
 
 
208 aa  141  8e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.56 
 
 
223 aa  141  8e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.21 
 
 
226 aa  141  9e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  39.01 
 
 
226 aa  140  9.999999999999999e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  41.1 
 
 
232 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008309  HS_0042  nitrate/nitrite response regulator protein  36.82 
 
 
209 aa  139  1.9999999999999998e-32  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  40.81 
 
 
226 aa  139  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  42.25 
 
 
214 aa  139  3e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  37.55 
 
 
227 aa  139  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.67 
 
 
216 aa  139  3.9999999999999997e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  39.55 
 
 
224 aa  139  4.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  40.54 
 
 
225 aa  138  6e-32  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  37.56 
 
 
216 aa  138  6e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  40.48 
 
 
215 aa  138  7e-32  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  39.91 
 
 
213 aa  138  7.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  41.95 
 
 
213 aa  137  8.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_010468  EcolC_1457  transcriptional regulator NarP  39.44 
 
 
215 aa  137  1e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.956805 
 
 
-
 
NC_010658  SbBS512_E0748  transcriptional regulator NarP  39.44 
 
 
215 aa  137  1e-31  Shigella boydii CDC 3083-94  Bacteria  normal  0.251733  n/a   
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  39.71 
 
 
222 aa  137  1e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_009800  EcHS_A2331  transcriptional regulator NarP  39.44 
 
 
215 aa  137  1e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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