More than 300 homologs were found in PanDaTox collection
for query gene Phep_2735 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_2735  response regulator receiver  100 
 
 
224 aa  451  1.0000000000000001e-126  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.28 
 
 
216 aa  159  5e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  38.6 
 
 
235 aa  158  8e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  38.25 
 
 
213 aa  155  4e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  38.64 
 
 
214 aa  154  9e-37  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.8 
 
 
213 aa  152  5e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  37.98 
 
 
215 aa  152  5e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  37.98 
 
 
215 aa  152  5e-36  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  37.98 
 
 
215 aa  152  5e-36  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  36.41 
 
 
213 aa  150  1e-35  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  37.8 
 
 
215 aa  150  1e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  36.32 
 
 
216 aa  149  2e-35  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  37.67 
 
 
232 aa  149  4e-35  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  36.54 
 
 
217 aa  149  4e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  36.74 
 
 
215 aa  149  5e-35  Burkholderia phymatum STM815  Bacteria  normal  normal  0.976007 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  36.49 
 
 
221 aa  148  6e-35  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.5 
 
 
213 aa  148  7e-35  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  41.06 
 
 
219 aa  148  8e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.62 
 
 
216 aa  148  8e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  37.8 
 
 
219 aa  148  8e-35  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  34.88 
 
 
222 aa  147  1.0000000000000001e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  37.44 
 
 
232 aa  146  2.0000000000000003e-34  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.41 
 
 
222 aa  146  2.0000000000000003e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.74 
 
 
219 aa  146  3e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.44 
 
 
232 aa  145  5e-34  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  36.45 
 
 
220 aa  144  9e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.16 
 
 
217 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  39.15 
 
 
213 aa  144  1e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.16 
 
 
217 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  37.8 
 
 
217 aa  144  1e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  36.15 
 
 
220 aa  144  1e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.74 
 
 
222 aa  143  2e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  39.3 
 
 
211 aa  143  2e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  34.42 
 
 
216 aa  143  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  36.49 
 
 
215 aa  143  2e-33  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  36.97 
 
 
206 aa  144  2e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  35.02 
 
 
219 aa  142  3e-33  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  3e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  3e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  3e-33  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.329832 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  3e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal 
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  35.02 
 
 
219 aa  142  4e-33  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  4e-33  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  35.65 
 
 
221 aa  142  4e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  36.79 
 
 
206 aa  142  4e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  34.56 
 
 
215 aa  142  4e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  35.35 
 
 
215 aa  142  5e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  35.41 
 
 
217 aa  142  5e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  35.35 
 
 
215 aa  142  5e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  35.35 
 
 
215 aa  142  5e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  36.06 
 
 
218 aa  141  7e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  33.81 
 
 
214 aa  141  8e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  34.12 
 
 
215 aa  141  8e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  37.62 
 
 
206 aa  140  9.999999999999999e-33  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  33.95 
 
 
215 aa  140  9.999999999999999e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  34.26 
 
 
212 aa  140  9.999999999999999e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  37.21 
 
 
213 aa  140  1.9999999999999998e-32  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  33.49 
 
 
210 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  34.88 
 
 
207 aa  140  1.9999999999999998e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  37.21 
 
 
213 aa  140  1.9999999999999998e-32  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  36.45 
 
 
220 aa  139  1.9999999999999998e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  34.42 
 
 
210 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  35.98 
 
 
219 aa  140  1.9999999999999998e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  33.18 
 
 
218 aa  139  1.9999999999999998e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  32.88 
 
 
218 aa  139  3e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  139  3e-32  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  37.2 
 
 
217 aa  139  3e-32  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  139  3.9999999999999997e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  139  3.9999999999999997e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  33.95 
 
 
215 aa  139  3.9999999999999997e-32  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  139  3.9999999999999997e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  139  3.9999999999999997e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  32.88 
 
 
282 aa  139  4.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  37.93 
 
 
214 aa  138  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  33.02 
 
 
216 aa  138  6e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  35.05 
 
 
214 aa  138  6e-32  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  36.22 
 
 
224 aa  138  7e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  33.96 
 
 
244 aa  138  7e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.18 
 
 
214 aa  138  7e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  33.18 
 
 
215 aa  138  7e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  33.18 
 
 
215 aa  137  8.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  33.65 
 
 
212 aa  137  1e-31  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  36.95 
 
 
219 aa  137  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  35.51 
 
 
215 aa  137  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal 
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  34.43 
 
 
219 aa  137  1e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.21854 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  33.95 
 
 
210 aa  137  1e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  32.56 
 
 
215 aa  136  2e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  35.89 
 
 
207 aa  136  2e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.126193 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  37.5 
 
 
214 aa  136  2e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  34.26 
 
 
214 aa  137  2e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  33.33 
 
 
218 aa  136  2e-31  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  34.42 
 
 
210 aa  136  3.0000000000000003e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0171986 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  35.41 
 
 
216 aa  136  3.0000000000000003e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  37.91 
 
 
217 aa  136  3.0000000000000003e-31  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  37.61 
 
 
223 aa  135  4e-31  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  35.89 
 
 
220 aa  135  5e-31  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  35.35 
 
 
208 aa  135  5e-31  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  35.24 
 
 
206 aa  135  6.0000000000000005e-31  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.94 
 
 
216 aa  134  8e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  37.22 
 
 
233 aa  134  8e-31  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
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