More than 300 homologs were found in PanDaTox collection
for query gene Reut_A3419 on replicon NC_007347
Organism: Ralstonia eutropha JMP134



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007347  Reut_A3419  LuxR response regulator receiver  100 
 
 
231 aa  458  9.999999999999999e-129  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  81.28 
 
 
228 aa  315  3e-85  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  65.53 
 
 
214 aa  253  1.0000000000000001e-66  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  65.05 
 
 
214 aa  253  2.0000000000000002e-66  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  6e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  6e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  6e-58  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  6e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  225  6e-58  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  6e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  57.77 
 
 
214 aa  224  7e-58  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  57.28 
 
 
214 aa  223  1e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  57.28 
 
 
214 aa  223  1e-57  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  57.28 
 
 
214 aa  223  1e-57  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  224  1e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  57.28 
 
 
214 aa  223  2e-57  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  57.28 
 
 
215 aa  223  3e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  57.28 
 
 
214 aa  222  4e-57  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  58.25 
 
 
214 aa  219  1.9999999999999999e-56  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.10411 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  54.46 
 
 
213 aa  209  4e-53  Burkholderia phymatum STM815  Bacteria  normal  normal  0.53826 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  51.46 
 
 
213 aa  206  2e-52  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  53.85 
 
 
215 aa  201  6e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  53.37 
 
 
218 aa  201  9.999999999999999e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal 
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  49.27 
 
 
224 aa  193  2e-48  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  49.53 
 
 
217 aa  193  2e-48  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  49.77 
 
 
214 aa  189  2.9999999999999997e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  50.97 
 
 
220 aa  187  2e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  50.47 
 
 
214 aa  174  9.999999999999999e-43  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_012560  Avin_41040  Two-component response regulator, LuxR family  49.52 
 
 
208 aa  170  2e-41  Azotobacter vinelandii DJ  Bacteria  normal  0.136918  n/a   
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  50 
 
 
222 aa  169  4e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  45.37 
 
 
206 aa  168  8e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  40.1 
 
 
215 aa  166  2e-40  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  39.63 
 
 
212 aa  163  2.0000000000000002e-39  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  47.57 
 
 
210 aa  164  2.0000000000000002e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  42.16 
 
 
206 aa  162  5.0000000000000005e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  40.89 
 
 
213 aa  158  6e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  39.63 
 
 
217 aa  158  7e-38  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  41.98 
 
 
233 aa  157  1e-37  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  37.07 
 
 
206 aa  154  1e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  39.72 
 
 
215 aa  153  2e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  39.17 
 
 
220 aa  154  2e-36  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  39.91 
 
 
217 aa  153  2.9999999999999998e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  38.21 
 
 
216 aa  152  5e-36  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  41.51 
 
 
219 aa  152  5.9999999999999996e-36  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  43.35 
 
 
213 aa  151  1e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  40.87 
 
 
213 aa  151  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  39.13 
 
 
212 aa  150  2e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  40.98 
 
 
228 aa  149  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  40.67 
 
 
229 aa  149  3e-35  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  45.62 
 
 
219 aa  149  3e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  43.2 
 
 
223 aa  149  5e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.658241 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  37.91 
 
 
223 aa  148  7e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.26 
 
 
218 aa  148  7e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  40.28 
 
 
213 aa  148  8e-35  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  40.28 
 
 
213 aa  148  8e-35  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  44.04 
 
 
217 aa  148  9e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  40.76 
 
 
220 aa  147  1.0000000000000001e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  37.14 
 
 
215 aa  146  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  40.48 
 
 
218 aa  145  4.0000000000000006e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.28 
 
 
218 aa  145  4.0000000000000006e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  41.46 
 
 
214 aa  145  5e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.139442 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.19 
 
 
217 aa  145  5e-34  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  42.34 
 
 
244 aa  145  5e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.19 
 
 
217 aa  145  5e-34  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.67 
 
 
221 aa  145  6e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  37.38 
 
 
218 aa  144  8.000000000000001e-34  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  37.67 
 
 
216 aa  144  9e-34  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  39.23 
 
 
224 aa  144  9e-34  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.2 
 
 
223 aa  144  1e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  37.9 
 
 
274 aa  144  1e-33  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  33.64 
 
 
218 aa  143  2e-33  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  39.52 
 
 
218 aa  144  2e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  39.52 
 
 
218 aa  144  2e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  36.84 
 
 
215 aa  144  2e-33  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  39.72 
 
 
218 aa  142  3e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  39.53 
 
 
215 aa  143  3e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  39.53 
 
 
215 aa  143  3e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  39.53 
 
 
215 aa  143  3e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.07 
 
 
223 aa  142  4e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  38.57 
 
 
222 aa  141  7e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  41.2 
 
 
219 aa  141  9e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  36.7 
 
 
226 aa  140  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  33.19 
 
 
234 aa  140  9.999999999999999e-33  Opitutus terrae PB90-1  Bacteria  normal  normal  0.14113 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  38.43 
 
 
222 aa  139  3e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  38.76 
 
 
214 aa  139  3e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  40.28 
 
 
213 aa  139  3.9999999999999997e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  36.97 
 
 
232 aa  139  3.9999999999999997e-32  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  37.56 
 
 
223 aa  139  4.999999999999999e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  38.39 
 
 
216 aa  138  7e-32  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  42.16 
 
 
226 aa  138  7.999999999999999e-32  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  39.51 
 
 
209 aa  137  1e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.41 
 
 
215 aa  137  1e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  40.47 
 
 
235 aa  137  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  36.97 
 
 
215 aa  137  2e-31  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  41.38 
 
 
213 aa  137  2e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.56 
 
 
216 aa  136  2e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  36.49 
 
 
232 aa  136  3.0000000000000003e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.56 
 
 
216 aa  136  3.0000000000000003e-31  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  39.62 
 
 
228 aa  135  5e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  39.61 
 
 
214 aa  135  6.0000000000000005e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>