| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0559 |
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| Symbol | |
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| ID | 5089505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 594948 |
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| End bp | 595583 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 644739958 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001192913 |
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| Protein GI | 146298322 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0841173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA AATATAAAAT GGTTGTGGTT GACGATCATC CAATTGTAAT TTCTGGAATT
TCAGGATTGC TGTCTGATTT AGATAATATT GAAATTGTAG AGAAAATGCA ATCCGGAGCT
TTGCTTCTCG ATTATATCGA AAACAACGAA GTCGATCTGG TTTTAATAGA TATTTTTCTG
CCGGTAGTAA CCGGAATAGA TTTGTGTAAA GCTATTAAAC AGAAATATTC TCAGGTTATT
GTTATTGGTA TGAGCAGTCA GTCTGAACGA AGCCTTGTGA TGCAGTTTAT TCAAAATGGC
GGAAATGGTT ATATTTTAAA AAGCGCTTCT TTTGAAGAGT TTAAAAACTG TATTAACAAA
GCAATTGAAG GAGAAATTGT TTTTAGTGAT GAGGTAAAAA CGATTGTAAG CCAGCCATTA
TCTGAAGATT TAGATAATAT TCCGAGTTTA AGCAGAAGAG AAAAAGATAT TGCACTTTTG
CTTTCAAAAG GAAAACAGAC TCAGGAAATT GCTGATGAAC TTTTTCTGAG TTTTTTAACT
GTACAAACAC ACAGACGTAA TATTCTTCAA AAATACAAAA CCAAAAATGT CGCAGAATTA
ATTACTCTGC TTTTAAAAAA TAATCTTTTA GACTAA
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| Protein sequence | MSKKYKMVVV DDHPIVISGI SGLLSDLDNI EIVEKMQSGA LLLDYIENNE VDLVLIDIFL
PVVTGIDLCK AIKQKYSQVI VIGMSSQSER SLVMQFIQNG GNGYILKSAS FEEFKNCINK
AIEGEIVFSD EVKTIVSQPL SEDLDNIPSL SRREKDIALL LSKGKQTQEI ADELFLSFLT
VQTHRRNILQ KYKTKNVAEL ITLLLKNNLL D
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