Gene PA14_38900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38900 
Symbol 
ID4382778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3467639 
End bp3468316 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID639325690 
Productputative two-component response regulator 
Protein accessionYP_791259 
Protein GI116049932 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.899747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TGCTGGTGGA CGATCATTTC GTGGTCCGCG AAGGGCTGGC CGCGCTGTTG 
CGCGGGCTGC TCCCCGACGT GGAGGTGAGC GAGGCCGGCG ATGGCGAAGA AGCCTTGCAG
GCGGTGCAGC GGGAAATTCC TTCGCTGGTC ATCGTCGATC TCGGCCTGCC GGGCATCAGC
GGCCTGGAAC TGACTCGCCG GCTGCGCCAG CGCCTGCCGC AGTTGCGTGT GCTGTTCTTC
AGCCTCCACG ACGAACTGGC CCTGGTGCGC CAGGCGCTGG ATGCCGGTGC CCGCGGCTAC
GTGACCAAGC GCGCGGCGCC GACGGTGCTG CTGGAGGCGA TACGGCGAGT GCTCGCCGGC
CAGCTCTATC TGGAGCAGCC CCTGGCCACG CGCCTGGCCT GCCAGTCGTG GGAAGAGCAG
GGCGGGGCAG CGTTGCGCGG GCTGACCCGT CGCGAGTTCG AGATCTTCCG CCTGCTCGCG
CGTGGCCTGG CCCTGCGCGA GGTGGCCGAG CACCTGGGGG TAAGCGCCAA GACCGTGTCC
AACCATGTCA GCCTGCTCAA GCAGAAGTTG CAGGTGAGTA CCCAGGCGGA ACTGGTGCAC
CGGGCCATCG ACAGCGGCGT GCTGCGGCTG GGCCTGCCGC TGCCGCTCGC CGAGGAGGCT
CGCGGCAGCC TCGGCTAG
 
Protein sequence
MKILLVDDHF VVREGLAALL RGLLPDVEVS EAGDGEEALQ AVQREIPSLV IVDLGLPGIS 
GLELTRRLRQ RLPQLRVLFF SLHDELALVR QALDAGARGY VTKRAAPTVL LEAIRRVLAG
QLYLEQPLAT RLACQSWEEQ GGAALRGLTR REFEIFRLLA RGLALREVAE HLGVSAKTVS
NHVSLLKQKL QVSTQAELVH RAIDSGVLRL GLPLPLAEEA RGSLG