| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2236 |
|---|
| Symbol | |
|---|
| ID | 5150523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2309647 |
|---|
| End bp | 2310282 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557164 |
|---|
| Product | two-component LuxR family response regulator |
|---|
| Protein accession | YP_001238320 |
|---|
| Protein GI | 148253735 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.520528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.548087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGCG TTCTGCTCGT TGACGACCAC CCGGTCGTGG TTGCGGCCTG CCGCTGGCTG
CTGAGCGAGG CCGGGATCGG GGAGCTGTCC GAAGCGCATG ATGCCGAAAG CGCCTATGAG
GCCTTTGTGC GCGAGCGCCC GGACGCGGCG GTGGTCGACC TTCGCCTGCA GAGCCAGGAA
TTGGGCGGGA TCGGCCTGAT TCAGCGCATG CGCTCGCACG ACCCCGGGGC CAGGATCCTG
GTCTTCAGCA TGCTCGCCGA CCCGCGAATC GTCCGCTCGG CGATCGACGC CGGCGCGAGC
GGCTATCTGC TCAAGGATGC ACCGCCGCAC GAACTGCCGA AGGCGCTGGA TCAGATCCGA
TCGGGCGGCA CCTATCTCGA TCCGCAGCTT GCCAAGCGCA TTGCGTTATT GCGCAAGGAT
GCCGACGGCA CTGCAGCAAC AGCGCTGACC CAGCGTGAGC GTCAGGCGCT CGCGCTGCTC
GGGCAGGCGA AATCCTATCA GGCGATCGCG GATCAGCTCG GGATCAGCTA CAAGACCGTC
ATCAACCTGA CCTACCGGCT GCGACAGAAG CTCGGGGCGC GCAGCCTTCC GGACTTGGTT
CGGCTGGCGG TCGAGATGTC GCGCCCGAGC CTGTAA
|
|---|
| Protein sequence | MYRVLLVDDH PVVVAACRWL LSEAGIGELS EAHDAESAYE AFVRERPDAA VVDLRLQSQE
LGGIGLIQRM RSHDPGARIL VFSMLADPRI VRSAIDAGAS GYLLKDAPPH ELPKALDQIR
SGGTYLDPQL AKRIALLRKD ADGTAATALT QRERQALALL GQAKSYQAIA DQLGISYKTV
INLTYRLRQK LGARSLPDLV RLAVEMSRPS L
|
|---|
| |