More than 300 homologs were found in PanDaTox collection
for query gene M446_0653 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_0653  two component LuxR family transcriptional regulator  100 
 
 		 217 aa  408  1e-113  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  63.43 
 
 		 217 aa  237  8e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  60.19 
 
 		 217 aa  214  5e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  47.6 
 
 		 212 aa  142  4e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  40.58 
 
 		 211 aa  133  3e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  42.86 
 
 		 225 aa  131  1.0000000000000001e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  42.86 
 
 		 225 aa  131  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  41.06 
 
 		 208 aa  130  2.0000000000000002e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  42.38 
 
 		 226 aa  128  6e-29  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  44.02 
 
 		 210 aa  125  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  43.75 
 
 		 210 aa  125  7e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  43.63 
 
 		 210 aa  122  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  38.54 
 
 		 230 aa  116  1.9999999999999998e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  41.18 
 
 		 221 aa  116  3e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  41.18 
 
 		 229 aa  115  3.9999999999999997e-25  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  41.18 
 
 		 220 aa  115  6e-25  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  38.92 
 
 		 232 aa  113  3e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  39.41 
 
 		 228 aa  112  5e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  40.49 
 
 		 224 aa  111  8.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  35.12 
 
 		 213 aa  109  4.0000000000000004e-23  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  37.2 
 
 		 218 aa  108  6e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  42.16 
 
 		 225 aa  108  9.000000000000001e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  40.89 
 
 		 218 aa  108  9.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  42.16 
 
 		 225 aa  104  8e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.93 
 
 		 213 aa  103  2e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  37.86 
 
 		 210 aa  103  2e-21  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  31.86 
 
 		 213 aa  100  2e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.76 
 
 		 213 aa  100  2e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  37.5 
 
 		 212 aa  99.8  3e-20  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  32.7 
 
 		 215 aa  99.8  3e-20  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  36.1 
 
 		 212 aa  99  4e-20  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  99  4e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  37.56 
 
 		 223 aa  99.4  4e-20  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  99  4e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  99  4e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  35.61 
 
 		 216 aa  98.6  7e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  98.2  9e-20  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  35.61 
 
 		 212 aa  97.8  1e-19  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  36.27 
 
 		 213 aa  97.8  1e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  97.8  1e-19  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.41 
 
 		 217 aa  97.8  1e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  97.4  1e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  37.56 
 
 		 211 aa  97.8  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  38.39 
 
 		 221 aa  96.7  2e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.7  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  33.17 
 
 		 215 aa  96.7  3e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.92 
 
 		 214 aa  96.3  3e-19  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  31.58 
 
 		 221 aa  96.3  3e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  36.59 
 
 		 206 aa  96.3  3e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.78 
 
 		 215 aa  96.3  4e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  34.15 
 
 		 216 aa  95.9  4e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  31.6 
 
 		 219 aa  95.9  4e-19  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  32.51 
 
 		 233 aa  96.3  4e-19  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  31.43 
 
 		 214 aa  95.9  4e-19  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  36.45 
 
 		 214 aa  95.5  5e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  36.41 
 
 		 224 aa  95.5  5e-19  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  35.44 
 
 		 223 aa  95.1  6e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  39.6 
 
 		 219 aa  95.1  7e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  35.92 
 
 		 235 aa  94.7  9e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  31.25 
 
 		 208 aa  94.4  1e-18  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_2613  response regulator GacA  32.86 
 
 		 214 aa  94.7  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.466832  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  37.38 
 
 		 220 aa  94.4  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_008463  PA14_30650  response regulator GacA  32.86 
 
 		 214 aa  94.7  1e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00700013 
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  39.9 
 
 		 219 aa  93.6  2e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  30.66 
 
 		 219 aa  93.6  2e-18  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  35.1 
 
 		 219 aa  93.6  2e-18  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  33.17 
 
 		 211 aa  93.6  2e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  93.6  2e-18  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.24 
 
 		 216 aa  93.2  2e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_009727  CBUD_0828  response regulator  31.25 
 
 		 216 aa  93.2  3e-18  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0183204  n/a   
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  40 
 
 		 219 aa  92.8  3e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  36.19 
 
 		 224 aa  92.8  3e-18  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  37.81 
 
 		 207 aa  92.8  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  37.86 
 
 		 216 aa  92.8  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_24710  putative two-component response regulator  33.33 
 
 		 207 aa  92.8  4e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1030  two component LuxR family transcriptional regulator  35.44 
 
 		 215 aa  92.4  5e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  31.43 
 
 		 213 aa  92.4  5e-18  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  30.77 
 
 		 216 aa  92  6e-18  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  34.29 
 
 		 218 aa  92  6e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  32.68 
 
 		 220 aa  92  6e-18  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4470  two component LuxR family transcriptional regulator  34.78 
 
 		 232 aa  92  7e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.370568  n/a   
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  31.73 
 
 		 210 aa  91.7  7e-18  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  34.13 
 
 		 229 aa  91.7  9e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_009656  PSPA7_2093  putative two-component response regulator  33.33 
 
 		 207 aa  91.7  9e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  34.88 
 
 		 221 aa  91.3  1e-17  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  36.02 
 
 		 215 aa  91.3  1e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_009656  PSPA7_0036  putative two-component response regulator  33.65 
 
 		 207 aa  91.3  1e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.035019  n/a   
 
 
-
 
NC_010172  Mext_3270  response regulator receiver  39.42 
 
 		 220 aa  91.3  1e-17  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.336161 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  35.68 
 
 		 215 aa  91.3  1e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  36.02 
 
 		 215 aa  91.3  1e-17  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_00430  putative two-component response regulator  33.65 
 
 		 207 aa  91.3  1e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.247974 
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  36.02 
 
 		 215 aa  91.3  1e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  37.98 
 
 		 218 aa  90.9  1e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  34.15 
 
 		 212 aa  90.1  2e-17  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  32.7 
 
 		 215 aa  90.5  2e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
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