More than 300 homologs were found in PanDaTox collection
for query gene Reut_B4470 on replicon NC_007348
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B4470  two component LuxR family transcriptional regulator  100 
 
 
232 aa  468  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.370568  n/a   
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  67.63 
 
 
210 aa  281  7.000000000000001e-75  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  62.02 
 
 
212 aa  263  2e-69  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal 
 
 
-
 
NC_010676  Bphyt_6883  two component transcriptional regulator, LuxR family  62.86 
 
 
213 aa  263  3e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  0.239531  normal  0.170628 
 
 
-
 
NC_007952  Bxe_B2928  two component LuxR family transcriptional regulator  60.48 
 
 
213 aa  255  4e-67  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5940  LuxR family response regulator  59.62 
 
 
220 aa  248  6e-65  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000000781929  normal 
 
 
-
 
NC_007348  Reut_B5536  LuxR response regulator receiver  57.89 
 
 
209 aa  232  4.0000000000000004e-60  Ralstonia eutropha JMP134  Bacteria  normal  0.882777  n/a   
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  47.29 
 
 
208 aa  197  2.0000000000000003e-49  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1131  two component LuxR family transcriptional regulator  44.23 
 
 
236 aa  186  2e-46  Pseudomonas putida F1  Bacteria  normal  0.796271  normal  0.799889 
 
 
-
 
NC_008463  PA14_12780  putative two-component response regulator  45.24 
 
 
209 aa  187  2e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000436161  normal 
 
 
-
 
NC_002947  PP_1090  LuxR family DNA-binding response regulator  45.32 
 
 
207 aa  185  4e-46  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1160  putative two-component response regulator  45.24 
 
 
209 aa  185  5e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0122525  n/a   
 
 
-
 
NC_010322  PputGB1_4322  two component LuxR family transcriptional regulator  43.9 
 
 
207 aa  183  2.0000000000000003e-45  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0036  putative two-component response regulator  46.89 
 
 
207 aa  176  2e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  0.035019  n/a   
 
 
-
 
NC_009656  PSPA7_2093  putative two-component response regulator  46.89 
 
 
207 aa  176  2e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_00430  putative two-component response regulator  46.89 
 
 
207 aa  176  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.247974 
 
 
-
 
NC_008463  PA14_24710  putative two-component response regulator  45.54 
 
 
207 aa  175  5e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2114  LuxR response regulator receiver  40.65 
 
 
212 aa  174  9e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.22828 
 
 
-
 
NC_007492  Pfl01_4515  two component LuxR family transcriptional regulator  42.72 
 
 
208 aa  169  5e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00786387 
 
 
-
 
NC_007492  Pfl01_3974  two component LuxR family transcriptional regulator  40.29 
 
 
208 aa  168  6e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4151  DNA-binding response regulator, LuxR family  42.23 
 
 
208 aa  168  7e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.35782  n/a   
 
 
-
 
NC_007005  Psyr_3890  LuxR response regulator receiver  42.23 
 
 
208 aa  168  7e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.330128 
 
 
-
 
NC_011663  Sbal223_0174  two component transcriptional regulator, LuxR family  41.18 
 
 
208 aa  163  2.0000000000000002e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1620  two component LuxR family transcriptional regulator  39.61 
 
 
206 aa  162  4.0000000000000004e-39  Pseudomonas putida W619  Bacteria  normal  normal  0.0222153 
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  38.76 
 
 
210 aa  161  7e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  38.76 
 
 
210 aa  161  7e-39  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.110504 
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  39.23 
 
 
210 aa  161  1e-38  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  39.23 
 
 
210 aa  161  1e-38  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal 
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  39.23 
 
 
210 aa  161  1e-38  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_002947  PP_2101  LuxR family DNA-binding response regulator  38.65 
 
 
207 aa  160  2e-38  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00862279  normal  0.220235 
 
 
-
 
NC_010322  PputGB1_1643  two component LuxR family transcriptional regulator  39.02 
 
 
205 aa  159  2e-38  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.003137  normal 
 
 
-
 
NC_009512  Pput_3638  two component LuxR family transcriptional regulator  38.65 
 
 
205 aa  160  2e-38  Pseudomonas putida F1  Bacteria  normal  normal  0.489861 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  37.86 
 
 
210 aa  158  6e-38  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  37.86 
 
 
210 aa  158  6e-38  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0304  two component LuxR family transcriptional regulator  40.89 
 
 
207 aa  155  5.0000000000000005e-37  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  37.38 
 
 
210 aa  155  5.0000000000000005e-37  Yersinia pestis Angola  Bacteria  normal  normal  0.616678 
 
 
-
 
NC_009379  Pnuc_1808  two component LuxR family transcriptional regulator  37.81 
 
 
207 aa  149  5e-35  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.000516369  n/a   
 
 
-
 
NC_009436  Ent638_0993  transcriptional regulator FimZ  33.81 
 
 
210 aa  147  1.0000000000000001e-34  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.000287084 
 
 
-
 
NC_010623  Bphy_4334  two component LuxR family transcriptional regulator  39.02 
 
 
209 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  0.255025  normal 
 
 
-
 
NC_010676  Bphyt_6866  two component transcriptional regulator, LuxR family  40.8 
 
 
202 aa  146  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.140006  normal  0.169631 
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  36.06 
 
 
204 aa  147  2.0000000000000003e-34  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2350  two component LuxR family transcriptional regulator  37.07 
 
 
204 aa  141  9e-33  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00485  predicted DNA-binding transcriptional regulator  33.65 
 
 
210 aa  141  9.999999999999999e-33  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  33.65 
 
 
210 aa  140  9.999999999999999e-33  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  33.65 
 
 
210 aa  140  9.999999999999999e-33  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_009800  EcHS_A0610  transcriptional regulator FimZ  33.65 
 
 
210 aa  141  9.999999999999999e-33  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  33.65 
 
 
210 aa  141  9.999999999999999e-33  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  33.65 
 
 
210 aa  140  9.999999999999999e-33  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00490  hypothetical protein  33.65 
 
 
210 aa  141  9.999999999999999e-33  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3412  LuxR family DNA-binding response regulator  36.59 
 
 
204 aa  140  1.9999999999999998e-32  Pseudomonas putida KT2440  Bacteria  normal  normal  0.338288 
 
 
-
 
NC_007347  Reut_A0522  LuxR response regulator receiver  40.1 
 
 
212 aa  140  1.9999999999999998e-32  Ralstonia eutropha JMP134  Bacteria  decreased coverage  0.000276468  n/a   
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  33.65 
 
 
210 aa  140  1.9999999999999998e-32  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2528  two component LuxR family transcriptional regulator  36.59 
 
 
204 aa  138  8.999999999999999e-32  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0522002 
 
 
-
 
NC_007952  Bxe_B2906  two component LuxR family transcriptional regulator  39.3 
 
 
203 aa  137  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02279  DNA-binding response regulator in two-component regulatory system with EvgS  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1288  two component transcriptional regulator, LuxR family  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02240  hypothetical protein  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3600  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0441797 
 
 
-
 
NC_009801  EcE24377A_2655  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2506  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli HS  Bacteria  hitchhiker  0.00265649  n/a   
 
 
-
 
NC_010468  EcolC_1300  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2519  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  134  9.999999999999999e-31  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E2738  DNA-binding transcriptional activator EvgA  36.1 
 
 
204 aa  133  1.9999999999999998e-30  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0459  two component LuxR family transcriptional regulator  39.05 
 
 
207 aa  130  1.0000000000000001e-29  Cupriavidus metallidurans CH34  Bacteria  normal  0.957088  normal 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  34.63 
 
 
213 aa  126  3e-28  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_010658  SbBS512_E0462  transcriptional regulator FimZ  32.99 
 
 
199 aa  125  5e-28  Shigella boydii CDC 3083-94  Bacteria  normal  0.739138  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  35.92 
 
 
212 aa  123  2e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_007492  Pfl01_1863  two component LuxR family transcriptional regulator  34.29 
 
 
209 aa  122  4e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.207146  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  35.48 
 
 
211 aa  122  4e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1286  two component LuxR family transcriptional regulator  39 
 
 
213 aa  121  9.999999999999999e-27  Serratia proteamaculans 568  Bacteria  normal  normal  0.172682 
 
 
-
 
NC_010571  Oter_4250  two component LuxR family transcriptional regulator  34.88 
 
 
246 aa  119  3.9999999999999996e-26  Opitutus terrae PB90-1  Bacteria  normal  normal  0.59923 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  37.86 
 
 
235 aa  118  6e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  36.1 
 
 
216 aa  118  7.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  38.68 
 
 
210 aa  118  9e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  37.13 
 
 
206 aa  117  9.999999999999999e-26  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  33.81 
 
 
216 aa  117  1.9999999999999998e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  30.58 
 
 
214 aa  116  1.9999999999999998e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1429  two component LuxR family transcriptional regulator  33.99 
 
 
211 aa  116  1.9999999999999998e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.85494 
 
 
-
 
NC_004578  PSPTO_0560  DNA-binding response regulator, LuxR family  34.45 
 
 
209 aa  115  3.9999999999999997e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  34.5 
 
 
214 aa  115  5e-25  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.378798 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  31.58 
 
 
234 aa  115  6e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_007005  Psyr_4618  LuxR response regulator receiver  34.45 
 
 
209 aa  114  1.0000000000000001e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.601025 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  34.13 
 
 
209 aa  114  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  34.63 
 
 
216 aa  114  1.0000000000000001e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  32.69 
 
 
214 aa  114  2.0000000000000002e-24  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  33.96 
 
 
210 aa  113  2.0000000000000002e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  36.41 
 
 
215 aa  114  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  34.48 
 
 
239 aa  113  2.0000000000000002e-24  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  35.68 
 
 
212 aa  114  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  normal  0.996792 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  34.48 
 
 
210 aa  113  2.0000000000000002e-24  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  36.76 
 
 
212 aa  113  2.0000000000000002e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  33.01 
 
 
213 aa  113  3e-24  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  35.12 
 
 
214 aa  112  3e-24  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  33.49 
 
 
210 aa  113  3e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0171986 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  34.29 
 
 
212 aa  112  4.0000000000000004e-24  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  34.76 
 
 
210 aa  112  6e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  32.56 
 
 
223 aa  112  6e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  36.79 
 
 
210 aa  112  6e-24  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  36.68 
 
 
214 aa  112  6e-24  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  36.1 
 
 
210 aa  112  6e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
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