More than 300 homologs were found in PanDaTox collection
for query gene Mnod_8023 on replicon NC_011887
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  100 
 
 		 217 aa  422  1e-117  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  75.35 
 
 		 217 aa  299  3e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  62.5 
 
 		 217 aa  214  9.999999999999999e-55  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  40.19 
 
 		 211 aa  137  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  39.23 
 
 		 225 aa  134  7.000000000000001e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  39.23 
 
 		 225 aa  134  7.000000000000001e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  41.95 
 
 		 212 aa  134  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  38.83 
 
 		 208 aa  133  1.9999999999999998e-30  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  39.23 
 
 		 226 aa  133  1.9999999999999998e-30  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  39.81 
 
 		 210 aa  132  5e-30  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  39.41 
 
 		 210 aa  130  1.0000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  40 
 
 		 210 aa  129  3e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  40.89 
 
 		 221 aa  127  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  40.89 
 
 		 229 aa  127  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  40.89 
 
 		 220 aa  126  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  34.31 
 
 		 213 aa  117  9.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  36.95 
 
 		 224 aa  117  9.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  37.75 
 
 		 212 aa  115  3.9999999999999997e-25  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  37.31 
 
 		 232 aa  115  3.9999999999999997e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  37.25 
 
 		 212 aa  115  6e-25  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  34.31 
 
 		 230 aa  114  8.999999999999998e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  37.25 
 
 		 212 aa  114  1.0000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  35.41 
 
 		 216 aa  112  4.0000000000000004e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  36.02 
 
 		 215 aa  112  6e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.64 
 
 		 213 aa  111  7.000000000000001e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  34.93 
 
 		 210 aa  111  9e-24  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  34.55 
 
 		 216 aa  110  1.0000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  32.06 
 
 		 215 aa  111  1.0000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  36.95 
 
 		 228 aa  110  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  35.41 
 
 		 215 aa  110  2.0000000000000002e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  33.8 
 
 		 215 aa  109  3e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  33.8 
 
 		 215 aa  109  3e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  33.8 
 
 		 215 aa  109  3e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  33.8 
 
 		 215 aa  109  3e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  33.8 
 
 		 215 aa  109  3e-23  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  34.15 
 
 		 235 aa  109  4.0000000000000004e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  33.65 
 
 		 215 aa  109  4.0000000000000004e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  34.93 
 
 		 215 aa  108  5e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  40.56 
 
 		 210 aa  108  5e-23  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  33.33 
 
 		 215 aa  108  7.000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  37.25 
 
 		 218 aa  108  8.000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  33.8 
 
 		 282 aa  107  9.000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  35.44 
 
 		 216 aa  107  1e-22  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  35.29 
 
 		 220 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  35.07 
 
 		 215 aa  106  2e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  106  2e-22  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  35.07 
 
 		 215 aa  106  2e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  35.07 
 
 		 215 aa  106  2e-22  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  34.93 
 
 		 215 aa  106  3e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  106  3e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  34.76 
 
 		 215 aa  106  3e-22  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  106  3e-22  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  33.66 
 
 		 215 aa  105  4e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  105  5e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  34.45 
 
 		 215 aa  105  5e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  38.05 
 
 		 225 aa  105  6e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  35.98 
 
 		 221 aa  105  7e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_002947  PP_4099  DNA-binding response regulator GacA  33.82 
 
 		 212 aa  104  8e-22  Pseudomonas putida KT2440  Bacteria  normal  0.427607  normal  0.0594882 
 
 
-
 
NC_009512  Pput_1765  two component LuxR family transcriptional regulator  33.82 
 
 		 212 aa  104  8e-22  Pseudomonas putida F1  Bacteria  normal  0.456405  hitchhiker  0.00257365 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  43.04 
 
 		 225 aa  104  9e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_009656  PSPA7_2613  response regulator GacA  33.01 
 
 		 214 aa  104  1e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  0.466832  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  34.76 
 
 		 215 aa  103  1e-21  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  33.33 
 
 		 210 aa  104  1e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_008463  PA14_30650  response regulator GacA  33.01 
 
 		 214 aa  104  1e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00700013 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  33.49 
 
 		 229 aa  103  2e-21  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  33.17 
 
 		 214 aa  103  2e-21  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  33.97 
 
 		 215 aa  103  2e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  32.86 
 
 		 214 aa  102  3e-21  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  38.06 
 
 		 203 aa  102  4e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00551314 
 
 
-
 
NC_010322  PputGB1_3672  two component LuxR family transcriptional regulator  36.46 
 
 		 181 aa  102  5e-21  Pseudomonas putida GB-1  Bacteria  normal  0.309643  hitchhiker  0.000000290511 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  31.86 
 
 		 213 aa  102  6e-21  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  32.69 
 
 		 215 aa  101  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3375  two component LuxR family transcriptional regulator  32.37 
 
 		 212 aa  101  1e-20  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  34.98 
 
 		 214 aa  101  1e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  100  1e-20  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  37.97 
 
 		 215 aa  100  2e-20  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  32.7 
 
 		 210 aa  100  2e-20  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  32.21 
 
 		 214 aa  100  2e-20  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  29.9 
 
 		 213 aa  100  2e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  36.07 
 
 		 208 aa  100  2e-20  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  33.66 
 
 		 223 aa  100  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_004578  PSPTO_3024  DNA-binding response regulator GacA  32.54 
 
 		 214 aa  99.8  3e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.26082  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  32.37 
 
 		 217 aa  99.8  3e-20  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  34.8 
 
 		 215 aa  99.8  3e-20  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  35.61 
 
 		 211 aa  99.8  3e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  32.21 
 
 		 215 aa  99.8  3e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  32.06 
 
 		 215 aa  99.8  3e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_004578  PSPTO_4151  DNA-binding response regulator, LuxR family  35.52 
 
 		 208 aa  99.4  4e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.35782  n/a   
 
 
-
 
NC_007005  Psyr_3890  LuxR response regulator receiver  35.52 
 
 		 208 aa  99.4  4e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.330128 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  28.23 
 
 		 214 aa  99.4  4e-20  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  35.07 
 
 		 224 aa  99  4e-20  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  35.96 
 
 		 216 aa  99.4  4e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  33.99 
 
 		 233 aa  99  5e-20  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  33.17 
 
 		 212 aa  99  5e-20  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
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