| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4248 |
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| Symbol | |
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| ID | 6180783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1304660 |
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| End bp | 1305307 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684017 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001810928 |
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| Protein GI | 172063277 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.206342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG TGCTCATCGC CGACGACCAT ACGCTCGTGC GCGACGGTCT GCGGCACATC
CTCCAGAACG CCACCGGATT CGAGGTGGCC GGCGAAGCGT GCGACGGCCC GTCGACGATC
GCGCTGGTTC GTTCGACGCC CGCGCAGGTG CTGGTGCTCG ACCTGTCGAT GCCGGGCCGC
AACGGCGTCG AGCTGATCAA GCAGATCAAG GACGAGAAGC CCGCGCTGCG GGTGCTCGTG
CTGACCATGC ACGCGGAACA GCAATACGCG GTACGCGCGT TCCGCGCCGG TGCATCGGGC
TATCTGACGA AGGAAAGCGC GAGCGCCGAA CTGGTCGGCG CGGTGACCAA GGTTGCGTCG
GGCGGCGTCT ACGTGAGCCT CGCGATGGCC GAGCAGTTCG CGCAGAGCCT GAACGAGCCG
GCCGAGACGC TGCCGCACCA GCGGTTGTCC GATCGCGAGT TCGACGTGTT CCGCCGGATC
GCCGCCGGAC AGACGCTGAC CGAGATCGCG CAGGCGCTGT GCGTGAGCGC GAAGACGGTC
AGCACCTACA AGACCCGGAT CCTGGAAAAG ATGCAGATGC CCCACGAAGC GGCGCTGGTC
CGCTATGCGA TGCGGCACAA GCTGCTCGAC GAAACGGACG ATGTCTAG
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| Protein sequence | MIKVLIADDH TLVRDGLRHI LQNATGFEVA GEACDGPSTI ALVRSTPAQV LVLDLSMPGR
NGVELIKQIK DEKPALRVLV LTMHAEQQYA VRAFRAGASG YLTKESASAE LVGAVTKVAS
GGVYVSLAMA EQFAQSLNEP AETLPHQRLS DREFDVFRRI AAGQTLTEIA QALCVSAKTV
STYKTRILEK MQMPHEAALV RYAMRHKLLD ETDDV
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