| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3499 |
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| Symbol | |
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| ID | 6180214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 429604 |
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| End bp | 430215 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683268 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001810182 |
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| Protein GI | 172062531 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00551314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGGACG GACTGCGTCA CATCCTGGAA ACGGCCGGCG GTTTCGAAAT CGTCGGCGAG
GCGAGCGACG GCACGGCCGC GCTCGCGCTG GCCGAGCGTG GCGATGCCGA CGTGCTGCTG
CTCGACCTGT CGATGCCCGG GCCGACCGGC ATCGAGCTGA TCCGGCTCGT CAAGACGCGC
GCGCCGGCGC TGCGCATGCT GGTGCTCACG ATGCATGCGG AGGCGCAGTA CGCCGCGCGC
GCGTTCAAGG CCGGCGCGAC CGGCTACCTG ACCAAGGACA GCGCGACTGC CGAGCTGGTC
CAGGCCGTCA CGAAGGTCGC GGCGGGCGGC GTCTACGTGA GCCCGCAGGC GGCCGAAAGC
CTCGCGCGCA CGCTGCGCGC GCCGGTCGAA ATGCTGCCGC ACGAACGGTT GTCCGCGCGC
GAACTCGACG TGATGCGCCG CATCGTCGCG GGCCAGACGG TCACGCGGAT CGCGGCGGAA
CTCACGCTGA GCGCGAAGAC GGTCAGCACC TACAAGACGC GCATCCTCGA GAAGATGGAG
CTGCCGCACG AAGCCGCGCT GGTGCGCTAC GCCGTGCGCC ACGATCTCGA CCTCGGCGTC
GACGACGCAT GA
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| Protein sequence | MRDGLRHILE TAGGFEIVGE ASDGTAALAL AERGDADVLL LDLSMPGPTG IELIRLVKTR
APALRMLVLT MHAEAQYAAR AFKAGATGYL TKDSATAELV QAVTKVAAGG VYVSPQAAES
LARTLRAPVE MLPHERLSAR ELDVMRRIVA GQTVTRIAAE LTLSAKTVST YKTRILEKME
LPHEAALVRY AVRHDLDLGV DDA
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