| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4151 |
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| Symbol | |
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| ID | 1185831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4677998 |
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| End bp | 4678624 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395497 |
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| Product | DNA-binding response regulator, LuxR family |
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| Protein accession | NP_793912 |
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| Protein GI | 28871293 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.35782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAG TGCTGATCGT GGATGATCAT CCCGTCATTC GCCTTGCTGT GCGCATGCTG
ATGGAGCGTC ATGGCTATGA GGTCATCGCG GAGACTGACA ACGGTGTGGA TGCGCTGCAA
CTGGCACGTG AGCACCTTCC GGACATCGTC ATCCTTGACA TTGGTATACC CAAGCTAGAC
GGGCTGGAGG TTATCGCTCG TCTGTCAGCC ATGACATTGC CGTTCAAGGT GCTGATTCTG
ACGTCTCAGG CACCCGGCCA CTTCTCGATG CGTTGCATGC AGGCAGGCGC TGCCGGGTAT
GTCTGCAAGC AACAGGATCT GACCGAACTG CTCAGTGCTA TCAAGGCTGT GCTGTCAGGG
TACAGCTACT TTCCCAATCA GGCATTGCAC ACGGTTCGTT CCAGTATGGG GAACGCGAGC
GAATCGGACA TGGTTGACCG TCTTTCCGGC AGGGAAATGA TGGTTCTGCA GCAACTGGCC
AGAGGTAAAA CCAACAAGGA AATTGCAGAC GGCATGTTTT TGAGCAACAA GACGGTCAGT
ACCTATAAAA CGCGTTTATT GCTCAAGCTC AATGCGCATT CGCTGGTCGA TCTGATCGAG
CTTGCCCAGC GCAACGGGCT TGTCTGA
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| Protein sequence | MNKVLIVDDH PVIRLAVRML MERHGYEVIA ETDNGVDALQ LAREHLPDIV ILDIGIPKLD
GLEVIARLSA MTLPFKVLIL TSQAPGHFSM RCMQAGAAGY VCKQQDLTEL LSAIKAVLSG
YSYFPNQALH TVRSSMGNAS ESDMVDRLSG REMMVLQQLA RGKTNKEIAD GMFLSNKTVS
TYKTRLLLKL NAHSLVDLIE LAQRNGLV
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