Gene Bcenmc03_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3925 
Symbol 
ID6126758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp852005 
End bp852652 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID641651033 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001777566 
Protein GI170736306 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGG TAATTCTGGC TGACGATCAC GCAGTCATGC GGGACGGACT GCGTCACATC 
CTGGAACGGG CCGGCGGTTT CGAGATCGTC GGCGAGGCGA GCGACGGCTC GGGCACGCTC
GCGCTGGCCG AGCGCGCGGC CGCCGACGTG CTGCTGCTCG ACCTGTCGAT GCCCGCACCG
ACCGGCATCG AGCTGATCCG GCTGGTCAAG CGGCGGGCGC CGTCGCTGCG CACGCTGGTG
CTGACGATGC ACGCGGAAAC CCAGTACGCG GCACGCGCGT TCAAGGCGGG CGCCACCGGC
TACCTGACGA AGGACAGTGC GACGGCCGAA CTCGTCGAAG CCGTCGGCAA GGTGGCGGCA
GGCGGCGTCT ACGTGAGCCC GTCCGCGGCC GAAAGCCTCG CTCACACGCT GCGCGCGCCG
GCTCAGGCGC TGCCGCACGA ACGGCTGTCG GCGCGCGAGT TCGACGTGAT GCGCCGCATC
GTCGCGGGTC AGACCGTCAC GCGGATCGCG TCCGAACTCG CGCTGAGCGC GAAGACGGTC
AGCACGTACA AGACGCGCAT CCTCGAGAAA ATGGGGCTGC CGCACGAAGC CGCACTGGTC
CGCTACACGG TGCGCCACGA TCTCGACCTC GGGGACGACG ACGCATGA
 
Protein sequence
MIRVILADDH AVMRDGLRHI LERAGGFEIV GEASDGSGTL ALAERAAADV LLLDLSMPAP 
TGIELIRLVK RRAPSLRTLV LTMHAETQYA ARAFKAGATG YLTKDSATAE LVEAVGKVAA
GGVYVSPSAA ESLAHTLRAP AQALPHERLS AREFDVMRRI VAGQTVTRIA SELALSAKTV
STYKTRILEK MGLPHEAALV RYTVRHDLDL GDDDA