| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1784 |
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| Symbol | |
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| ID | 4580968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1778084 |
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| End bp | 1778758 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769102 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_915577 |
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| Protein GI | 119384521 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000422915 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAA CCGTCCCAAG CCCCGCCCCG CCGCTGCGCG TGCTGATCGT CGACGATCAC
CCGGTCGTCG CCGAGGGCTG GGAATGGATC ACCCGCGGCC GCCTGGATTG CGAGGTCATC
GCCGCCGCCA CGCCATCGCA GGGCTGGCGG GCCTGGCGGC GGCAGGCACC GGACGTGATC
GTCGTCGACC TGACCATGGG CGAGGCCAGG CTGGCAGGCG CCCGGCTGAT CGAGCGGCTG
CGCGCCGCCG GCGCGAACCA GCCGATCCTG GTCTTTACCA TGCATCGCAG CCCGATCATC
GCCCGGCGGG CGCTGCAGGC CGGCTGCAAC GGCATCATCA TGAAGGATTC GCCCTCGGAC
GATATCTGCG AGGCGCTGCG CGAGGTGGCC CGCGGCGGGG ACTACGTCCC GGCCGACCTG
GCGCGCCGCA TCGCCCTGCT GGAGCGGCCC GGCGCCACGC CGCCGCGCCC GCGCCTGACC
CCGCGCGAGC TGGACATCCT GCGCGCCATC GCCGAGGGGC TCAGCTATCG CGAGATCGCC
GAGCGGGCGA ACATCAGCTA CAAGACCGTC TCGAACGTCA GCCAGACGCT CAAGGACAAG
CTGTCGGCGC AAAGCTTCGC CGACCTGGTC GTCAAGGCGA TCCGCCACCT CGAAGAGACC
CGCGACGGGA TCTGA
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| Protein sequence | MTATVPSPAP PLRVLIVDDH PVVAEGWEWI TRGRLDCEVI AAATPSQGWR AWRRQAPDVI
VVDLTMGEAR LAGARLIERL RAAGANQPIL VFTMHRSPII ARRALQAGCN GIIMKDSPSD
DICEALREVA RGGDYVPADL ARRIALLERP GATPPRPRLT PRELDILRAI AEGLSYREIA
ERANISYKTV SNVSQTLKDK LSAQSFADLV VKAIRHLEET RDGI
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