More than 300 homologs were found in PanDaTox collection
for query gene Mnod_8027 on replicon NC_011887
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  100 
 
 		 211 aa  424  1e-118  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  62.07 
 
 		 210 aa  260  1e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  61.08 
 
 		 210 aa  255  3e-67  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  60.7 
 
 		 221 aa  246  2e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  60.7 
 
 		 229 aa  246  2e-64  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  60.7 
 
 		 220 aa  245  3e-64  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  60.1 
 
 		 224 aa  242  1.9999999999999999e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  57.43 
 
 		 230 aa  231  8.000000000000001e-60  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  55.94 
 
 		 225 aa  229  2e-59  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  55.94 
 
 		 225 aa  229  2e-59  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  54.85 
 
 		 226 aa  229  2e-59  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  50.49 
 
 		 208 aa  208  4e-53  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  49.51 
 
 		 210 aa  203  1e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  49.28 
 
 		 212 aa  200  9.999999999999999e-51  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  45.27 
 
 		 211 aa  177  1e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  43.56 
 
 		 218 aa  176  2e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  43.35 
 
 		 206 aa  150  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  38.92 
 
 		 223 aa  148  5e-35  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  37.68 
 
 		 224 aa  146  3e-34  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  38.76 
 
 		 215 aa  137  2e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  40.58 
 
 		 232 aa  134  7.000000000000001e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  36.76 
 
 		 213 aa  130  1.0000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  38.94 
 
 		 217 aa  130  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  36.45 
 
 		 213 aa  129  4.0000000000000003e-29  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  39.71 
 
 		 217 aa  128  8.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  36.95 
 
 		 218 aa  127  9.000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  36.23 
 
 		 212 aa  125  4.0000000000000003e-28  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  37.75 
 
 		 214 aa  125  4.0000000000000003e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  38.24 
 
 		 211 aa  124  1e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  39.61 
 
 		 217 aa  124  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  38.35 
 
 		 233 aa  120  9.999999999999999e-27  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  38.16 
 
 		 212 aa  120  9.999999999999999e-27  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  38.16 
 
 		 212 aa  120  1.9999999999999998e-26  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  37.68 
 
 		 212 aa  119  3e-26  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_008825  Mpe_A3043  LuxR family DNA binding response regulator  35.15 
 
 		 209 aa  119  3.9999999999999996e-26  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  35.64 
 
 		 215 aa  119  3.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  35.75 
 
 		 214 aa  118  6e-26  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  37.44 
 
 		 216 aa  117  9e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1030  two component LuxR family transcriptional regulator  35.47 
 
 		 215 aa  117  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2855  two component transcriptional regulator, LuxR family  38.12 
 
 		 217 aa  116  1.9999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  34.1 
 
 		 242 aa  116  3e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  35.96 
 
 		 214 aa  116  3e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  35.29 
 
 		 220 aa  115  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  115  3.9999999999999997e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  115  3.9999999999999997e-25  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  115  3.9999999999999997e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  115  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  37.98 
 
 		 216 aa  115  5e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  115  5e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  37.26 
 
 		 225 aa  115  5e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  36.32 
 
 		 222 aa  115  6.9999999999999995e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  32.55 
 
 		 234 aa  114  7.999999999999999e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  36.23 
 
 		 210 aa  114  1.0000000000000001e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_007347  Reut_A1785  two component LuxR family transcriptional regulator  36.59 
 
 		 206 aa  114  1.0000000000000001e-24  Ralstonia eutropha JMP134  Bacteria  normal  0.762084  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.27 
 
 		 215 aa  114  1.0000000000000001e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  37.38 
 
 		 223 aa  114  1.0000000000000001e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  36.54 
 
 		 215 aa  113  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  34.98 
 
 		 214 aa  113  2.0000000000000002e-24  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  113  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  35.92 
 
 		 219 aa  112  3e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  35.78 
 
 		 217 aa  112  3e-24  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_1848  response regulator  34.95 
 
 		 218 aa  111  6e-24  Serratia proteamaculans 568  Bacteria  normal  0.0524957  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  33.65 
 
 		 229 aa  110  1.0000000000000001e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  32.67 
 
 		 211 aa  109  3e-23  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  34.95 
 
 		 210 aa  109  3e-23  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  36.76 
 
 		 225 aa  109  3e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  34.47 
 
 		 210 aa  108  6e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  34.76 
 
 		 219 aa  108  8.000000000000001e-23  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.21 
 
 		 216 aa  107  1e-22  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  33.33 
 
 		 219 aa  107  1e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  33.96 
 
 		 217 aa  106  3e-22  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  35.61 
 
 		 210 aa  106  3e-22  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  33.01 
 
 		 214 aa  105  3e-22  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_012912  Dd1591_1518  response regulator  33.01 
 
 		 220 aa  106  3e-22  Dickeya zeae Ech1591  Bacteria  normal  0.121615  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  34.74 
 
 		 216 aa  106  3e-22  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33 
 
 		 214 aa  105  4e-22  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  34.29 
 
 		 219 aa  105  4e-22  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  34.78 
 
 		 218 aa  105  4e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  34.78 
 
 		 235 aa  105  4e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  37.2 
 
 		 209 aa  103  1e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  32.37 
 
 		 229 aa  103  1e-21  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  32.35 
 
 		 213 aa  103  2e-21  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_009438  Sputcn32_1639  response regulator  32.04 
 
 		 226 aa  103  2e-21  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00137195  n/a   
 
 
-
 
NC_009727  CBUD_1093  response regulator  33.17 
 
 		 217 aa  103  2e-21  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.120555  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0986  LuxR family transcriptional regulator  33.17 
 
 		 217 aa  103  2e-21  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  31.55 
 
 		 214 aa  103  2e-21  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  31.55 
 
 		 214 aa  103  2e-21  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_008700  Sama_1607  response regulator  33.01 
 
 		 214 aa  103  2e-21  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000106395  normal  1 
 
 
-
 
NC_009901  Spea_1953  response regulator  32.52 
 
 		 214 aa  103  3e-21  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00404481  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  34.6 
 
 		 213 aa  103  3e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  31.55 
 
 		 214 aa  103  3e-21  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
NC_009654  Mmwyl1_3242  two component LuxR family transcriptional regulator  35.41 
 
 		 213 aa  102  3e-21  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000371761  hitchhiker  0.000468813 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  32.84 
 
 		 213 aa  102  4e-21  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  36.1 
 
 		 219 aa  102  4e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
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