| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3242 |
|---|
| Symbol | |
|---|
| ID | 5366698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3678287 |
|---|
| End bp | 3678928 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640805617 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001342083 |
|---|
| Protein GI | 152997248 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000371761 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000468813 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG TGTTGATTGT TGACGACCAT GACGTGGTTA GCCAAGGTAT TAGTCGTGTA
TTACAGGATG TAAAAGGTGT TGAGGTAGTG GGTGTAGTGC ATAGCGGTGA AGAGGCCATT
ATTCAGTCCA AGATATTATT ACCTGATATT ATTTTGATGG ACGTGCATAT GCCGGGAATT
GGCGGTTTAG GTGCAACGAA AGAAATAAAG CGCATTTTAC CGAAAACCAA GATCATTGCT
TTGTCTGCAT TGGATGACAA TTTATACCCA GTGAAGTTAT TAGAAGCGGG AGCATCTGGT
TATCTTACTA AAGGCACCAA TACGTCTGAG CTATTAGAAG CTATTCAAAT GGTGTCTAAA
GGCGAGCATT ATATTTCTAA AAGCATTGCG CAGAAAATGG CGCTGTCTAA GTTTTCCATA
GATGGGCAAG GTTCGCCATT GGGGCAATTA TCAGACAGAG AATTGCAAGT GGCTCAAATG
ATCGTGGATT GCAAAAAATC CAACGAAATT GCAGAGCACC TATGTGTGAG TCCTAAAACC
GTGAGCACTT ATCGTACTCG TATTTTTACG AAATTGAACA TTGAAAGTGA TGTCGAGCTG
ATTCGCTTGG CGGTACGTTA TAATGTGCTT GGTATGGGCT AG
|
|---|
| Protein sequence | MLKVLIVDDH DVVSQGISRV LQDVKGVEVV GVVHSGEEAI IQSKILLPDI ILMDVHMPGI
GGLGATKEIK RILPKTKIIA LSALDDNLYP VKLLEAGASG YLTKGTNTSE LLEAIQMVSK
GEHYISKSIA QKMALSKFSI DGQGSPLGQL SDRELQVAQM IVDCKKSNEI AEHLCVSPKT
VSTYRTRIFT KLNIESDVEL IRLAVRYNVL GMG
|
|---|
| |