| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1904 |
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| Symbol | |
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| ID | 3973460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2077405 |
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| End bp | 2078061 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925015 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_531780 |
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| Protein GI | 90423410 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0420846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACAG TGCTGATCAT CGACGACCAT CCGATCGTGC TGCAGGGCTG CGCGCGGATC
CTGGAGGCCA ATGGACCGAC CAAGGTGCTG ACCGCGGTCA GCATGGTCGA CGGTTTCCGG
CTGTACCGGC AACATGACCC GGACGTCATC ATCGTCGATC TGACGATGCA CACCGGCCTG
CTCAGCGGAC TGTCGTTCAT TCGCAGGATG CGGGTCGTCA ACCGGCGGAT TCCGATCCTG
GTGCTCAGCA TGCATCGCGA CCCGGTGATC GTCAGCCGCG CGTTGCAGGC TGGCGCCTCC
GGCTATGTGC TGAAGGATTC CGCCGCCGAA GACCTGTTGA AGGCGATCAA ACGGGTCAGC
GACGGCCGCC CCTTCATCAG CGATGAGCTC GCGGCCGACA TCGTGCTGAT GGAAACCCGC
GGCCAGAAGC ACCGCCTGCA AACCATGACG CTGCGCGAAC TCGAGCTGTT GAGCATCCTG
GCCGAAGGCA AGCCCTATGG CTTGATCGCC GAAGAACTCA ACGTCAGTTA CAAGACGGTG
GCCAACTCGG TGGCGCTGAT CAAGAACAAG CTCGGCGTCC GCACGCTGCC GGAACTGATG
CGCATCGCCA TCGACCAACT GCCCTCGATC GAAACCACCG CAGCGCCCAG ACGCTAG
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| Protein sequence | MTTVLIIDDH PIVLQGCARI LEANGPTKVL TAVSMVDGFR LYRQHDPDVI IVDLTMHTGL
LSGLSFIRRM RVVNRRIPIL VLSMHRDPVI VSRALQAGAS GYVLKDSAAE DLLKAIKRVS
DGRPFISDEL AADIVLMETR GQKHRLQTMT LRELELLSIL AEGKPYGLIA EELNVSYKTV
ANSVALIKNK LGVRTLPELM RIAIDQLPSI ETTAAPRR
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