More than 300 homologs were found in PanDaTox collection
for query gene Bind_0304 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  100 
 
 		 229 aa  469  1.0000000000000001e-131  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  67.65 
 
 		 211 aa  289  2e-77  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  43.5 
 
 		 206 aa  170  1e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  36.87 
 
 		 232 aa  152  4e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  38.69 
 
 		 212 aa  149  3e-35  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  38.28 
 
 		 215 aa  144  1e-33  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  37.8 
 
 		 220 aa  141  7e-33  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  36.95 
 
 		 213 aa  139  3e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  39.8 
 
 		 220 aa  139  3.9999999999999997e-32  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  39.6 
 
 		 210 aa  137  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  36.41 
 
 		 221 aa  136  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  37.91 
 
 		 217 aa  134  9.999999999999999e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  37.25 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  37.56 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  36.32 
 
 		 216 aa  132  5e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  37.62 
 
 		 222 aa  130  2.0000000000000002e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  39.11 
 
 		 220 aa  130  2.0000000000000002e-29  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  38.5 
 
 		 208 aa  129  5.0000000000000004e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  37.5 
 
 		 205 aa  129  5.0000000000000004e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  38.61 
 
 		 221 aa  128  6e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  36.32 
 
 		 226 aa  128  6e-29  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  38.61 
 
 		 229 aa  128  6e-29  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  36.27 
 
 		 218 aa  127  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  35.89 
 
 		 225 aa  126  3e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  35.89 
 
 		 225 aa  126  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  36.76 
 
 		 225 aa  126  3e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  30.94 
 
 		 242 aa  125  5e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  125  5e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  38.05 
 
 		 225 aa  125  5e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  35.47 
 
 		 210 aa  125  6e-28  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  39.5 
 
 		 219 aa  124  1e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  36.49 
 
 		 224 aa  123  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  36.23 
 
 		 223 aa  124  2e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  35.47 
 
 		 216 aa  123  2e-27  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_0828  response regulator  35.47 
 
 		 216 aa  123  2e-27  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0183204  n/a   
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  36.45 
 
 		 218 aa  122  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  35.44 
 
 		 223 aa  122  4e-27  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.15 
 
 		 233 aa  122  7e-27  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  122  7e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  36.63 
 
 		 208 aa  121  8e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  32.84 
 
 		 212 aa  121  9e-27  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  36.49 
 
 		 214 aa  120  9.999999999999999e-27  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  38.5 
 
 		 219 aa  121  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  30.1 
 
 		 212 aa  120  9.999999999999999e-27  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  34.83 
 
 		 223 aa  120  1.9999999999999998e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010513  Xfasm12_2177  response regulator receiver protein  36.45 
 
 		 220 aa  120  3e-26  Xylella fastidiosa M12  Bacteria  normal  0.430622  n/a   
 
 
-
 
NC_010577  XfasM23_2089  two component LuxR family transcriptional regulator  36.45 
 
 		 220 aa  120  3e-26  Xylella fastidiosa M23  Bacteria  normal  0.954326  n/a   
 
 
-
 
NC_010172  Mext_3270  response regulator receiver  38 
 
 		 220 aa  119  3e-26  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.336161 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  35.1 
 
 		 209 aa  119  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  32.84 
 
 		 212 aa  119  4.9999999999999996e-26  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  35.78 
 
 		 214 aa  118  7e-26  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_0998  response regulator  35.78 
 
 		 214 aa  118  7e-26  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_01515  transcriptional regulator LuxR/uhpA family  34.83 
 
 		 215 aa  118  7.999999999999999e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.422594  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  33.33 
 
 		 215 aa  117  9.999999999999999e-26  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  31.73 
 
 		 215 aa  117  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  32.35 
 
 		 212 aa  117  1.9999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_009092  Shew_1824  response regulator  31.16 
 
 		 229 aa  117  1.9999999999999998e-25  Shewanella loihica PV-4  Bacteria  normal  0.152948  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  33.17 
 
 		 213 aa  116  3e-25  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  36.27 
 
 		 213 aa  116  3e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.64 
 
 		 224 aa  116  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  31.1 
 
 		 215 aa  115  5e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  34.83 
 
 		 215 aa  115  5e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A0986  LuxR family transcriptional regulator  35.96 
 
 		 217 aa  115  6e-25  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  31.55 
 
 		 216 aa  115  6e-25  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  35.12 
 
 		 209 aa  115  6e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_009727  CBUD_1093  response regulator  35.96 
 
 		 217 aa  115  6e-25  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.120555  n/a   
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  36.14 
 
 		 212 aa  115  6e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  34.95 
 
 		 218 aa  115  6e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  35.92 
 
 		 209 aa  115  6e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  34.62 
 
 		 215 aa  115  6e-25  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  35.75 
 
 		 220 aa  115  6.9999999999999995e-25  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  32.84 
 
 		 214 aa  115  6.9999999999999995e-25  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  34.16 
 
 		 211 aa  115  7.999999999999999e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  33 
 
 		 209 aa  114  8.999999999999998e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_009438  Sputcn32_1639  response regulator  31.25 
 
 		 226 aa  114  8.999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00137195  n/a   
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  37.31 
 
 		 219 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_011663  Sbal223_1782  response regulator  31.07 
 
 		 214 aa  114  1.0000000000000001e-24  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  35.75 
 
 		 208 aa  114  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  33.67 
 
 		 218 aa  114  1.0000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2600  response regulator  31.07 
 
 		 214 aa  114  1.0000000000000001e-24  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_009997  Sbal195_2677  response regulator  31.07 
 
 		 214 aa  114  1.0000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  34.31 
 
 		 213 aa  114  1.0000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3468  two component transcriptional regulator, LuxR family  37.31 
 
 		 219 aa  114  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_2562  response regulator  31.07 
 
 		 214 aa  114  1.0000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_009831  Ssed_2455  response regulator  30.1 
 
 		 214 aa  114  1.0000000000000001e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  0.140183  normal  0.431169 
 
 
-
 
NC_012917  PC1_2202  two component transcriptional regulator, LuxR family  30.77 
 
 		 213 aa  114  2.0000000000000002e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0478  two-component response regulator  34.62 
 
 		 215 aa  114  2.0000000000000002e-24  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0760202 
 
 
-
 
NC_007005  Psyr_4618  LuxR response regulator receiver  33.65 
 
 		 209 aa  113  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.601025 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  34.48 
 
 		 210 aa  114  2.0000000000000002e-24  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  31.07 
 
 		 214 aa  113  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  31.55 
 
 		 214 aa  114  2.0000000000000002e-24  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  33.17 
 
 		 210 aa  113  2.0000000000000002e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.0171986 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  31.07 
 
 		 214 aa  113  2.0000000000000002e-24  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  33.98 
 
 		 218 aa  112  3e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  33.98 
 
 		 218 aa  112  3e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  35.12 
 
 		 211 aa  113  3e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_004347  SO_1860  response regulator  31.07 
 
 		 214 aa  112  4.0000000000000004e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  33.17 
 
 		 210 aa  112  6e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  34.8 
 
 		 216 aa  112  6e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  34.48 
 
 		 214 aa  112  6e-24  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
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