More than 300 homologs were found in PanDaTox collection
for query gene M446_4923 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_4923  two component LuxR family transcriptional regulator  100 
 
 		 210 aa  412  1e-114  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  88.52 
 
 		 210 aa  365  1e-100  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  68.45 
 
 		 229 aa  283  1.0000000000000001e-75  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  68.45 
 
 		 221 aa  283  2.0000000000000002e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  67.96 
 
 		 220 aa  281  7.000000000000001e-75  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  68.93 
 
 		 224 aa  280  8.000000000000001e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  61.08 
 
 		 211 aa  255  3e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  57.64 
 
 		 226 aa  227  1e-58  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  58.42 
 
 		 230 aa  226  2e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  57.14 
 
 		 225 aa  223  2e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  57.14 
 
 		 225 aa  223  2e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  58.05 
 
 		 212 aa  221  7e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  57.84 
 
 		 210 aa  219  1.9999999999999999e-56  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  53.23 
 
 		 208 aa  213  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  48.02 
 
 		 218 aa  197  7.999999999999999e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  49.5 
 
 		 211 aa  189  2.9999999999999997e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  44.12 
 
 		 206 aa  150  8.999999999999999e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  40.78 
 
 		 232 aa  141  7e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008687  Pden_2990  two component LuxR family transcriptional regulator  41 
 
 		 223 aa  140  9.999999999999999e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.656569  normal  0.240376 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  37.56 
 
 		 213 aa  137  8.999999999999999e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  37.25 
 
 		 229 aa  133  1.9999999999999998e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  39.22 
 
 		 224 aa  132  3.9999999999999996e-30  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  40.59 
 
 		 212 aa  131  6.999999999999999e-30  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  37.44 
 
 		 211 aa  130  2.0000000000000002e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  38.65 
 
 		 215 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  41.95 
 
 		 220 aa  128  5.0000000000000004e-29  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  39.34 
 
 		 222 aa  128  5.0000000000000004e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_011894  Mnod_7040  two component transcriptional regulator, LuxR family  41.26 
 
 		 217 aa  128  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  39.52 
 
 		 214 aa  128  7.000000000000001e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  40.78 
 
 		 218 aa  127  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_010717  PXO_00996  response regulator  39.22 
 
 		 210 aa  125  3e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_010717  PXO_06170  response regulator  39.22 
 
 		 210 aa  125  3e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  40.49 
 
 		 210 aa  124  1e-27  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  34.95 
 
 		 213 aa  123  2e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  35.32 
 
 		 212 aa  122  3e-27  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  39.34 
 
 		 219 aa  122  5e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011887  Mnod_8023  two component transcriptional regulator, LuxR family  39.32 
 
 		 217 aa  120  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.634105  n/a   
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  37.38 
 
 		 211 aa  117  1.9999999999999998e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  40.2 
 
 		 223 aa  116  3e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  33.95 
 
 		 213 aa  115  3.9999999999999997e-25  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.36 
 
 		 216 aa  115  5e-25  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  38.94 
 
 		 222 aa  115  5e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  35.98 
 
 		 242 aa  115  5e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  37.32 
 
 		 219 aa  114  6.9999999999999995e-25  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_010511  M446_0653  two component LuxR family transcriptional regulator  43.14 
 
 		 217 aa  114  7.999999999999999e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.8237  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  38.1 
 
 		 216 aa  114  7.999999999999999e-25  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  40.72 
 
 		 218 aa  114  8.999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  37.62 
 
 		 236 aa  114  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  36.67 
 
 		 219 aa  114  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  36.22 
 
 		 222 aa  114  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  38.76 
 
 		 212 aa  114  1.0000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  39.42 
 
 		 235 aa  114  1.0000000000000001e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.62 
 
 		 216 aa  114  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  38.24 
 
 		 216 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  34.63 
 
 		 212 aa  113  2.0000000000000002e-24  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  34.63 
 
 		 212 aa  113  2.0000000000000002e-24  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  39.02 
 
 		 228 aa  113  2.0000000000000002e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  40 
 
 		 213 aa  113  2.0000000000000002e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  37.5 
 
 		 217 aa  112  4.0000000000000004e-24  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  34.47 
 
 		 224 aa  112  4.0000000000000004e-24  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  36.36 
 
 		 219 aa  112  4.0000000000000004e-24  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  34.15 
 
 		 212 aa  112  4.0000000000000004e-24  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  35.68 
 
 		 226 aa  112  5e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  37.56 
 
 		 218 aa  111  6e-24  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  36.84 
 
 		 219 aa  111  7.000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  36.84 
 
 		 219 aa  111  7.000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  38.1 
 
 		 219 aa  111  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  42.49 
 
 		 220 aa  110  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal  1 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  34.76 
 
 		 234 aa  110  1.0000000000000001e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  37.68 
 
 		 214 aa  111  1.0000000000000001e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  40.49 
 
 		 219 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.32 
 
 		 216 aa  110  2.0000000000000002e-23  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  38.83 
 
 		 214 aa  109  3e-23  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_009832  Spro_1848  response regulator  32.2 
 
 		 218 aa  109  3e-23  Serratia proteamaculans 568  Bacteria  normal  0.0524957  normal  1 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  37.86 
 
 		 215 aa  109  3e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  37.44 
 
 		 205 aa  109  3e-23  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  36.36 
 
 		 233 aa  108  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  38.35 
 
 		 215 aa  108  5e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  38.38 
 
 		 211 aa  108  6e-23  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  37 
 
 		 221 aa  108  6e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  38.35 
 
 		 215 aa  108  6e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  38.28 
 
 		 210 aa  108  8.000000000000001e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_011663  Sbal223_1782  response regulator  32.2 
 
 		 214 aa  108  9.000000000000001e-23  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_009052  Sbal_2562  response regulator  32.2 
 
 		 214 aa  108  9.000000000000001e-23  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  35.12 
 
 		 233 aa  107  9.000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_009665  Shew185_2600  response regulator  32.2 
 
 		 214 aa  108  9.000000000000001e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_009997  Sbal195_2677  response regulator  32.2 
 
 		 214 aa  108  9.000000000000001e-23  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.27 
 
 		 213 aa  107  1e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1639  response regulator  31.71 
 
 		 226 aa  107  1e-22  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00137195  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  38.21 
 
 		 226 aa  107  1e-22  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  32.2 
 
 		 216 aa  107  1e-22  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  34.69 
 
 		 209 aa  107  1e-22  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  35.27 
 
 		 214 aa  107  1e-22  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_011662  Tmz1t_0180  two component transcriptional regulator, LuxR family  36.45 
 
 		 213 aa  107  1e-22  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  32.2 
 
 		 214 aa  107  1e-22  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  36.06 
 
 		 223 aa  107  1e-22  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  40.98 
 
 		 219 aa  107  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1608  response regulator  32.2 
 
 		 214 aa  107  1e-22  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_009436  Ent638_2501  response regulator  32.52 
 
 		 218 aa  107  2e-22  Enterobacter sp. 638  Bacteria  hitchhiker  0.000242353  normal  0.495647 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  34.6 
 
 		 228 aa  107  2e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>