Gene Tmz1t_0180 details

Gene Information

• Locus tag: Tmz1t_0180
• ID: 7085277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 211241
• End bp: 211882
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643697222
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_002353871
• Protein GI: 217968637
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGC TGATCGTCGA CGATCATCCG GTGATGCGCT TCGGCGTGCG CCAGCTCGTG 
ACCCAACGCT GGCCCGACGC CGTGATCGGC GAGGCCTCCT GCCTGGCGCA GGCGCTCGAA 
CAGGTGCGGG CGGCGGAATG GGAGCTCGCC GTGCTCGACC TGTCGATGCC CGACACCAGC 
GGGCTGGAGG GGCTCGTGCG GCTGCACCGT GCCGCACCGC TCACCCGGCT GCTGGTGCTG 
AGCATGCACG ACGAGGCGGC TTATGCGGCG CGTGCGCTGC AGCTCGGTGC CGCCGGCTAC 
CTGACCAAGG AGCACGCGAC CACCGAGCTG GTCGCCGCGA TCGAGCGCGT GCGCAGCGGC 
CAGCGCTACA TCAGCTCCGA CCTCGCCGCC CGCCTCGCCG ATCTGCTCTC GGGCGAGGCG 
CCGGCGCGTG CGCCGCACGA AACGCTGTCG GCGCAGGAAT ACCGCGTGCT GCTGCTGATC 
GCCGCCGGGC ACGGCGCGAG CGAGATCGCC GAGATCATGC ATCTGTCGGT GAAGACGGTG 
GGCACCTACC GCAGCCGCAT CATCGACAAG ACCGGACTCG CCAATACGGC GGAGATGGCG 
CGCTACTGTT CCGAGCACGG GCTGGTGGAT CGGGGGGGCT GA 

 

Protein sequence

MKLLIVDDHP VMRFGVRQLV TQRWPDAVIG EASCLAQALE QVRAAEWELA VLDLSMPDTS 
GLEGLVRLHR AAPLTRLLVL SMHDEAAYAA RALQLGAAGY LTKEHATTEL VAAIERVRSG 
QRYISSDLAA RLADLLSGEA PARAPHETLS AQEYRVLLLI AAGHGASEIA EIMHLSVKTV 
GTYRSRIIDK TGLANTAEMA RYCSEHGLVD RGG