| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2990 |
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| Symbol | |
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| ID | 4581556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 163940 |
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| End bp | 164611 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639770316 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_916769 |
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| Protein GI | 119385714 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.656569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.240376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTG CGCTGAAACT GCAATCAGAC GACGCCCGCC CCCTGCAGAT CCTGATCGTG
GACGACCACC CCGTCGTCGC CGAAGGCTGG GGGCGGATCA TCCGCACCAA GACCGCCTGC
GAGATCGCCT CGGCGCCGTC GGCATCCGAG GGTTGGCGCG CCTGGAGGCA GGCCCGCCCC
GACCTGATGG TGGTGGACCT GAGCATCGGC CGAAACAAGA TCGCCGGAAT CCGGCTGATC
GAGCGCTTGC GGCGCGTCGA TCCCGACTTG CCGATCCTGG TCTTCACGAT GCACCGCAGT
CCCGTCCTGG CCCGCCGCGC GCTGATGTTC GGTGCGAACG GGATCATCAA CAAGGACAGT
CCTCCCGCAG AAATATGCGC GGCCTTCACC GAGGTGGCTC GAGGTGGCAA TTACGTCGAC
TCGCGTCTGG CGATGCAGAT CGCTTTGCTG AACGTCTCGC GCCCAGGAAC GAGCGCCCCG
CGCCTGACCG GCCGTGAGGA GGAGATCCTG GGCATGATCA CCGAAGGCAT GTCCTATCGC
GACATCGCGG ACCGGGCCTG CATCAGCTAC AAGACAGTTT CGAACGTCAG CCTGGTACTG
AAAGACAAAC TCGGCGCGGC AAACCTTGCC GATCTGGTGG TCAAGGGCAT CCGCTATTTC
GAAGGGGACT AG
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| Protein sequence | MQAALKLQSD DARPLQILIV DDHPVVAEGW GRIIRTKTAC EIASAPSASE GWRAWRQARP
DLMVVDLSIG RNKIAGIRLI ERLRRVDPDL PILVFTMHRS PVLARRALMF GANGIINKDS
PPAEICAAFT EVARGGNYVD SRLAMQIALL NVSRPGTSAP RLTGREEEIL GMITEGMSYR
DIADRACISY KTVSNVSLVL KDKLGAANLA DLVVKGIRYF EGD
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