| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1639 |
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| Symbol | |
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| ID | 5079383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1869104 |
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| End bp | 1869784 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498784 |
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| Product | response regulator |
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| Protein accession | YP_001183163 |
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| Protein GI | 146292739 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00137195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGGG CAGTAAAATC GAAAAGGTGG ATTAAGTTGA TATCGATATA TTTAGTTGAC
GATCATGAGC TTGTAAGAAC TGGGATCCGC CGCATCTTGG AGGATGAACG TGGGATTAAA
GTGATAGGTG AAGCCCCTGA TGGTGAAACC GCGGTACAAT GGTCTCGCCA AAATGAAGCT
GATGTCATCT TAATGGATAT GAATATGCCT GGGATGGGGG GGCTGGAAGC CACTCGTAAA
ATTTTACGTT ATCAACCCCA TGCAAAAATT ATTGTGTTAA CTGTTCACAC GGAAGATCCG
TTCCCAAGTA AAGTGATGCA GGCGGGAGCT TCGGGGTATC TCACAAAAGG GGCTACACCA
CCTGAAGTAT TACAAGCGAT ACGTCAGGTT TCCCGTGGGC AACGTTATTT ATCCCCCGAA
ATTGCCCAGC AAATGGCGCT GAGTCAATTT AACCCCGCTG ATGAAAATCC ATTTAAAGCC
TTGTCTGAGC GTGAATTGCA GATCATGTTA ATGATCACTA ATGGTGAGAA GGTGAATGAT
ATTTCTGAGC AGCTCAACCT CAGTCCTAAA ACGGTTAACA GCTATCGCTA CCGTTTATTC
GCTAAGCTTG GGATCAGTGG TGATGTCGAA CTGACACGTC TAGCCATTCG TTACAAAATG
CTGGATGCGG GTCATTTTTA A
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| Protein sequence | MDRAVKSKRW IKLISIYLVD DHELVRTGIR RILEDERGIK VIGEAPDGET AVQWSRQNEA
DVILMDMNMP GMGGLEATRK ILRYQPHAKI IVLTVHTEDP FPSKVMQAGA SGYLTKGATP
PEVLQAIRQV SRGQRYLSPE IAQQMALSQF NPADENPFKA LSERELQIML MITNGEKVND
ISEQLNLSPK TVNSYRYRLF AKLGISGDVE LTRLAIRYKM LDAGHF
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