Gene PputGB1_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3131 
Symbol 
ID5870916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3507356 
End bp3507994 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID641548247 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001669359 
Protein GI167034128 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.33361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TGTTGGTCGA TGACCATGCC GTGGTCCGCC AGGGCTACGC CAGCCTGCTG 
CGGGCGGTGC TGCCGTTGAT GCAGGTGCGT GAGGCTGCCA GTGGTGAAGA GGCGCTGGCC
CGGGTGCAGG AGCAAGTCCC CAACCTGGTG ATCATGGACT TTGGCCTGCC CGGTATCAGT
GGCCTGGAAA CCACCCGTCG CCTGCGCCAG CGCCTGCCGC AACTGCGGGT ACTGTTTTTC
AGCATGCACG ACGAGCTGCC GCTGGTGCGC CAGGCGCTGG ACGCGGGGGC CTCGGGCTAC
CTGACGAAGA ACTCGGCGCC CGAGGTGTTG ATCGAGGCGG TGCAGCGGGT GATGGCCGGG
CATGCCTACA TCGAGCAGCC TCTGGCCACC CAGTTGGCGT GCACGTCACA GCAGAGCGCC
AGTGATCCAC GGTTGCAGCG CATGACCCAG CGCGAGCTGG AGATTTTCAC GATGCTGGCC
AAGGGGACGC CGATGCGGGT GATTGCCGAG CAGTTGTGTA TCAGTGCCAA GACCGTGTCC
AACCACCTGA CCTTGCTCAA GAGCAAGTTG CAGGTCAGCT CGCATGCCGA GCTGGTGCAC
CTGGGGATCG ACCTTGGGGT GGTACGGGTG GCGGGGTGA
 
Protein sequence
MNIVLVDDHA VVRQGYASLL RAVLPLMQVR EAASGEEALA RVQEQVPNLV IMDFGLPGIS 
GLETTRRLRQ RLPQLRVLFF SMHDELPLVR QALDAGASGY LTKNSAPEVL IEAVQRVMAG
HAYIEQPLAT QLACTSQQSA SDPRLQRMTQ RELEIFTMLA KGTPMRVIAE QLCISAKTVS
NHLTLLKSKL QVSSHAELVH LGIDLGVVRV AG